Anolis sagrei ordinatus (Brown anole): 132778244
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Entry
132778244 CDS
T09595
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132778244 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asao03041
]
132778244 (SF3B1)
03036 Chromosome and associated proteins [BR:
asao03036
]
132778244 (SF3B1)
Spliceosome [BR:
asao03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
132778244 (SF3B1)
Complex B
132778244 (SF3B1)
Complex C
U2 SnRNP specific factors
132778244 (SF3B1)
Chromosome and associated proteins [BR:
asao03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
132778244 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
132778244
NCBI-ProteinID:
XP_060636999
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKN
RRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGASSQPPSKRKRRWDQTADQTPGTTPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERD
TPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGT
PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAVFPEGYRVLPPPAGYV
PIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDV
DESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSP
TLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAK
AAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARH
TGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIE
SFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDE
EMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELAN
KVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQE
QTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVM
KTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTP
ILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFG
YIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELN
VQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGF
GCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVR
DVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYVL
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagacgcacgaagatattgaagcacagattcgagaaatccaaggg
aaaaaagctgcccttgatgaagctcaaggagtgggccttgattctactggatactatgat
caagagatctatggcggaagtgacagtaggtttgctggatatgtaacttcaattgcagca
actgaactagaagatgatgatgatgactactcctccacaagcttacttggccagaagaaa
cctgggtaccacgcaccagtggcactgcttaatgatataccacagtcaactgaacagtat
gatccatttgctgaacatcgtccccaaaagattgccgatagggaagatgaatacaaaaat
cgcagacggatgatgattatttcccctgagcgtcttgatccttttgcagatggagggaag
acacctgatcctaaaatgaatgccagaacatatatggatgttatgcgtgaacaacatcta
actaaggaagagagggaaattaggcagcagcttgcagaaaaggctaaagctggggaactt
aaagtcgtcaatggtgcttcatcccagccaccatcaaaacgcaaacggcgttgggatcag
actgccgaccaaactcctggtaccacaccaaagaaattatctagctgggatcaagctgag
actcctgggcatactccatccctgcggtgggatgaaacccctggtcgtgcaaaggggagt
gagacccctggtgccacccctggatctaaaatatgggaccccactcccagtcatacacca
gcaggagctgcgacacccggacgtggtgacacccctggtcacgcaacaccaggccatggc
ggtgcaacttccagtgcacggaagaaccgatgggatgagactcccaaaacagaaagagat
actcctggtcatggaagcggatgggctgaaactcctcgaacagatcgtggaggcgactcc
atcggtgaaacaccaacccctggagcaagtaaaagaaaatcacgttgggatgaaacacct
gcaagccaaatgggtggcagcactcctgtcttaacacctggcaaaacacccattggtaca
cctgccatgaacatggcaacccctaccccaggccatataatgagcatgactcctgaacag
ctccaagcctggcgatgggagagagagatagatgagagaaacaggcccctttcagatgaa
gagttggatgctgtgtttccggagggttacagggttctccctcctccagcgggttatgtc
cctattcgtactccggctcgtaaacttacagcgactcccacacctctgggcggcatgact
gggttccatatgcaaacagaagataggactatgaagagtgtcaatgaccagccctcggga
aatctccctttcctaaagccagatgacatacaatactttgataaactactggttgatgtt
gatgaatcaactcttagtccagaggaacagaaagagagaaaaataatgaaattacttttg
aagatcaagaacggcacccctccaatgaggaaggctgctttacgacagattactgataaa
gctcgtgaatttggagccggtccactgttcaatcagattttgcccctgctgatgtctcca
actcttgaagatcaagaacgccatttgcttgtcaaagttattgacaggattttatataaa
ttggatgacttggtccgaccatatgtgcataagatccttgtggtcattgaaccgttgctg
attgatgaagactactatgccagagtagaaggaagagaaattatttccaacttggctaag
gcagctggtctggctaccatgatctccaccatgcgacctgatattgataacatggatgag
tatgtccgtaacacaactgcccgagcctttgctgtcgttgcctctgctctgggcatccct
tcccttttgccctttttgaaagctgtgtgtaaaagcaagaagtcttggcaggccaggcac
actggcatcaagattgtgcagcagattgccatcctgatgggctgtgctattttacctcat
ctgagaagtttggtggaaattattgagcatggtcttgtggatgagcagcaaaaagtgcgc
accatcagtgctttggctattgctgctttagcagaggcagccactccctatggcatagag
tcctttgactctgtcctcaaacccctatggaagggtatccgtcagcacaggggaaaaggt
ctggctgctttcttgaaagctattgggtatcttattccacttatggatgctgagtatgcc
aattactataccagagaagtgatgctgattcttatcagagagttccagtctcctgatgaa
gaaatgaaaaagattgtgttgaaggtagtcaagcagtgctgtggcacagatggtgtggaa
gcaaactacattaagacagaaattttgcccccatttttcaagcacttctggcaacacaga
atggctctggacagaagaaattacagacagttggttgatacaactgtggagcttgcaaac
aaagttggagcagcagagattatttcaaggattgtggatgatctgaaagatgaggctgag
cagtacagaaaaatggttatggaaaccattgagaagatcatggggaacctgggtgcagcg
gatattgaccacaaactggaggaacagcttattgatggcatcttgtatgccttccaggaa
cagactacagaggattcggtgatgctgaatggttttggcacagtggtcaatgctctgggt
aagcgcgtgaaaccctacttgccccagatctgtggtacagttttgtggcgtttgaacaac
aaatcggccaaagtaagacagcaagcggctgacctgatatctcgtactgcagttgtcatg
aagacctgtcaagaggaaaaattgatgggacacttgggtgtggtactctatgagtatctg
ggtgaagaataccccgaagtgctgggcagcattttaggagcactcaaagccattgtgaat
gtcataggtatgcacaaaatgactcctccaattaaagacctgctgccaagactcacacct
attttgaagaacaggcatgaaaaggtgcaggaaaattgcattgacctggttggacgtatt
gcagacaggggggcagagtatgtttctgcaagggaatggatgaggatttgctttgaactg
ctagagttgttaaaagctcataagaaagctattcgaagagctacagtgaatacgtttggt
tatatcgcaaaagctattggaccccacgatgtgctggcaacacttctaaataatttgaaa
gtacaagaaagacagaacagagtgtgtaccacggtagcgatagccattgtagctgaaacg
tgctcacctttcaccgtcctccctgcactcatgaatgaatacagagtaccagaactcaac
gtccagaatggtgtattaaaatctctttccttcctctttgaatatattggagaaatgggg
aaagattacatctatgctgtaaccccattgcttgaagatgctttaatggacagggacctt
gttcacagacagaccgcaagtgccgtggtacagcatatgtcccttggggtatatggtttt
ggctgtgaagactcgttgaatcacttgttaaactacgtgtggcccaatgtgtttgagacc
tcgcctcacgtcatccaagccgtcatgggagccctggaaggcctgcgggtggccattggg
ccctgccgaatgttgcagtattgcttacagggtttgtttcaccctgccagaaaagtcaga
gatgtgtattggaagatctataattccatctacattggttcacaggatgctttaatagca
cattatccacggatctacaatgacgaaaaaaacacatacattcgttatgaacttgattat
gtcttgtaa
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integrated database retrieval system
