Anolis sagrei ordinatus (Brown anole): 132778620
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Entry
132778620 CDS
T09595
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132778620 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asao03032
]
132778620 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
asao03400
]
132778620 (TOPBP1)
DNA replication proteins [BR:
asao03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
132778620 (TOPBP1)
DNA repair and recombination proteins [BR:
asao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
132778620 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
132778620
NCBI-ProteinID:
XP_060637782
LinkDB
All DBs
Position
Unknown
AA seq
1495 aa
AA seq
DB search
MMKNNKEPYLVKFIKSPGNSDFFLQALESIKEFQSEEYLQILENEAALRIQENDKSLYIC
DPFSGTVFNHLQKLGCRIVGPQVVIYCMKNQRCVPRADYPVFNMTMADVTISCTNLQKEI
REEIHKHVQMMGGRVYRDLNVLVTHLIAGEVGSKKYLVAANLKKPILLPSWIQALWDKSK
HRMIRYTDINMDDYLCPLFLGCTVCVTGLSSTDRKEVQRLTTENGGQYTGQLKMNECTHL
IVHEPKGQKYECARRWNVHCVSMQWFFDSIEKGFCQDESMYTVIPKSKQENVPSTSTPTS
QASSFDSRTLSDVSHISNINLTAINETSCSSSMNTRLVHPSDELNNLDISSLQAPEDLLD
GCRIYLCGFSGKKLDKIRRLINCGGGVRFNQLNEDVTHVIVGDDDKELKQFLKKTVQRPY
AVTVQWLLECFKKGYLQPEEQYIPENYQPVNSPVLEQPVFLKRNSVVKKETINIQKAPEA
DDDLLSQYVTQDSTVVVAGGGSENDHTALQEKKEFSVTHSSLGETTTIAEGTLFSGKRFR
LQGFGKEDESCMRALIEENAGKVLPQQSKAVADYAVVPLLGYTVEPTVGDVVTNTWLVMC
VEQQSLQDPQSSPLFTPVPIKEGSTPLQQCVLSFSQFSGAERDSLIYLANILGARVQEFF
VRKANPRKGMLVSTHLVVKEPEGSKYEAAKKWNLPAVTMAWLLESSRTGEKADESKFLID
NVVTEENPTDQLDGVADASASNMPNLLETGKKTAVTPLDMNRFQSKAFRTVISHHIDKKP
SPPLSGKPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALATPEGANQQNRTLSTPL
SEVIGRNLKLALANSTRQATALTASPQLKDATQQIVEESKPLENVVICVSKKLSKKQSEL
NAIAASLGADYRWCFDETVTHFIYQGRQNDNNREYKSAKERGIHIVSEHWLLESAQEYKR
LPESLYPHTYNPKMSLNISGVQDDRGSERLDSTGKMRKENEAVPLDDNSREDQIKEGVSI
EKEENTSKGVLTQTLEMRENFQRQLQEIMTATSLPKLQGQRTSLSRNGFDISPSTPDGPR
SLRNGRSKVLEALRQTRQIVTDVNTEPSQNEQIIWDDPTAREERARLASNLQWPNSPSQC
SEQIQGNAVNVGNDSIRKSLSDTEIAQMAIEDPVKTDIAEVPRLPVCRSPKTPQNEDNVI
LTPLAPAIAFPLANPPVAPQPKENAIQTDANASEEAAKQRKFQLSSLNPQERIDYYHLIE
KLGGVVLEKQCFDPSCTHTIVGHPLRNEKFLASMAAGKWVLHRSYLEACRAARCFVEEED
YEWGSNSILSVLSGINVIQKKLAIAAMRWRKTIQRRKRESGIIEGAFSGWKVILNVDPAK
EAGFKRLLESGGATVFPSHSPPPFREVTHLFADFNKLKPGDLRIDIAEVAHQGVNCLKPE
YIADYLIQEPPPPMENYCLPEAGAHLQNGKEHRIGSSQKRKAPEEAHTVKRFRMH
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaataacaaggaaccatatcttgtgaagttcatcaagtctccagggaactca
gattttttccttcaggcccttgaatccattaaagaatttcagtcagaagaatatctccaa
attcttgaaaatgaagctgcactgagaatacaggagaatgacaaatccctttatatatgt
gatccattcagtggcactgtttttaatcaccttcaaaagttgggctgtaggattgttgga
ccacaggttgttatctattgtatgaagaaccagcggtgtgtcccaagagctgactatcca
gtatttaatatgaccatggctgatgtgacgatatcatgtacaaatcttcagaaggaaatt
agggaagaaatccacaagcatgtacagatgatgggaggccgtgtatacagagatcttaat
gtgttagtaacacatcttatagctggagaagttggaagcaaaaaatacttagttgctgct
aatttaaagaaacccattttgcttccctcttggatacaagctttatgggataaatccaaa
cataggatgattagatacacagacataaatatggatgactatttgtgcccattgtttctc
ggctgtacggtgtgtgtaactggcttgagcagcacagatcgaaaagaggttcaacgtctc
accaccgaaaatggtggccagtatacagggcaactcaaaatgaatgagtgcactcacctt
attgttcatgagccaaaaggtcagaaatatgaatgtgcaagaaggtggaatgtccattgt
gtatctatgcagtggttttttgacagcattgaaaaaggattttgccaggatgaatcaatg
tatacagtaatccccaaatcaaagcaagaaaatgtaccaagtacatcgactccgactagc
caagctagcagttttgacagtcgaaccctctcagatgtcagccacatttcaaacatcaat
ttaacagccattaatgaaacatcatgtagctcttccatgaacaccagattggtccatcct
tctgatgaactgaacaatttggatattagttccttgcaagcacctgaagatttactggat
ggatgcagaatttatctttgtggttttagtggcaagaaattggataaaattagacggctt
atcaactgtggaggtggcgttcgtttcaatcaacttaatgaagatgtaacacatgtcatt
gtaggtgatgatgataaggaactaaagcagttcctaaaaaagacagtgcagaggccatat
gctgtaacagtacaatggcttttagaatgctttaaaaaaggttatttacaacctgaagag
cagtacatccccgaaaactatcaaccagtaaacagtccagttttggagcagccagtcttc
ctcaaaagaaacagtgttgtgaagaaagaaactatcaatatccaaaaggctccagaagca
gatgatgatctgctttctcagtatgtaactcaggattctacagtagttgttgctggaggc
ggcagtgaaaacgaccacactgcccttcaagaaaaaaaagagttctctgtcacccacagt
tccctgggagagacaactacaattgctgaaggcaccttgttcagtgggaaaaggtttcgt
cttcagggcttcggaaaagaagatgaatcctgcatgagggctctgattgaagaaaatgct
gggaaggttctgcctcaacaaagtaaagcagttgctgactatgcagtggtccccctcctg
ggttatacagtggagcccactgttggagatgtggttacaaatacatggctggtgatgtgt
gtagaacagcagtctctgcaagatcctcagtcaagtccgcttttcacaccagtaccaata
aaagaaggcagtaccccgttacagcagtgtgttctgtctttcagccaatttagtggggca
gaaagagattctttaatttatttagcaaatattcttggtgcaagagttcaagaattcttt
gtgagaaaagccaacccaaggaaagggatgcttgtcagcacccatctggtagtgaaggag
ccagaaggctccaaatacgaagctgcaaagaagtggaatcttcctgctgttactatggct
tggctgttggagagttcaaggactggagaaaaggctgacgaaagcaagttcctaattgat
aatgtagtcactgaagagaatcccacagatcagcttgatggagtggcagatgcttcagct
tcaaatatgcctaatctgcttgaaactgggaagaaaacagctgtaacaccactggatatg
aacaggtttcagagtaaggctttccgaactgttatttcacatcacattgataaaaagcca
agccctccactgagtggaaagccattacagaaagaaccgtctctgcatctggatacacca
tctaaatttttatctaaagacaagctcttcaagccatcttttgatgttaaggatgctcta
gcagctttggcaactccagagggcgctaaccaacaaaacagaacgctgagcactcctctt
tcagaagtcattggcaggaacttgaagctggctttagcaaatagcactcggcaagcaact
gctcttactgccagtcctcagctgaaagatgcaacccaacaaattgtagaagagtcaaaa
ccgctagagaatgttgttatatgtgtgagtaagaagctcagtaaaaagcagagtgagttg
aatgctattgctgcatcccttggagcagattacaggtggtgttttgatgaaactgtaaca
catttcatctaccagggaaggcaaaatgataataaccgagagtacaaatctgcaaaagaa
agggggatacatatagtgtcagaacattggcttttggagagtgcacaagaatataaacgg
ctaccggaatcgctatatccccatacatataaccctaaaatgagtttgaatattagtggt
gtccaagatgacagaggctcagagaggcttgactcaactggaaaaatgaggaaggagaat
gaggctgtcccattggatgacaatagtagagaagatcaaataaaagagggagtttctatt
gaaaaagaggaaaatacatcaaaaggagtgctaacacagacactggaaatgagggagaac
tttcaaaggcagctacaggaaatcatgactgccacatccctgcccaagttgcaaggacag
aggacctctttatctagaaatgggtttgacatctcgccatccactccagatgggcctcgt
tctttgcgtaacggacgcagtaaagtcttggaagctctaaggcagacccgccagatcgtg
actgacgtcaatacggagccatctcagaatgagcagattatctgggacgatcccactgca
agggaagagagagcgaggcttgccagcaacctgcagtggcccaatagtccttcgcaatgt
tccgaacaaattcaagggaatgcagtcaatgttggcaacgactcaattagaaaatccttg
agtgatacagaaattgctcagatggccattgaggatcctgtgaaaacagatatagctgag
gtcccaaggctgccagtgtgtagaagtccgaaaacccctcaaaatgaagacaatgtgatc
ctgactcctttggcacctgccattgccttcccactggcaaaccctcctgttgctcctcag
ccaaaagaaaatgccattcaaacagacgcaaatgcctctgaagaagcagcaaaacagcgt
aaatttcagctgtcttccctaaaccctcaagaacgaattgattattatcatctcattgag
aaactaggcggggtggtgcttgagaagcagtgctttgaccccagctgcacacacaccatt
gtggggcaccctctgcgcaacgagaagttcttggcctcgatggctgctgggaagtgggtt
ctccatcgctcctacctggaagcatgcagagcagcacggtgctttgtagaggaggaagat
tatgaatggggaagcaactccatactcagtgttctgtctggcatcaatgtaatccagaag
aaattagcaattgcagcaatgagatggaggaaaacaattcagagaaggaaaagggaaagc
ggaattattgagggagcatttagtggctggaaagtaatcttgaatgttgaccccgccaaa
gaagcaggcttcaaacgtcttctggagtcaggaggagcaacggtgttcccttctcattcg
ccacctccctttagagaagttactcatctatttgccgattttaataaactgaagccagga
gatttaagaattgatattgcagaagtggcccatcaaggagtgaactgcctgaagccagaa
tacattgctgattaccttatacaggagccaccacctccaatggaaaattattgtttgcca
gaagctggtgcccatcttcagaatggaaaagaacacagaattggatcgtctcaaaagcga
aaagctcctgaagaagcacacacagtgaagagatttagaatgcactga
DBGET
integrated database retrieval system
