Anolis sagrei ordinatus (Brown anole): 132780850
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Entry
132780850 CDS
T09595
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132780850 (SNRNP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asao03041
]
132780850 (SNRNP40)
Spliceosome [BR:
asao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
132780850 (SNRNP40)
Complex C
U5 SnRNP specific factors
132780850 (SNRNP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_HPS5
Cytochrom_D1
WD40_like
Beta-prop_IFT140_2nd
PROPPIN
WDR54
Beta-prop_Nup120_160
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
132780850
NCBI-ProteinID:
XP_060640673
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MLDPQKRKAPTDLALVVAAKKPRQEAAGAGPPSGPPGALLPAGPPRCSSLQAPIMLLSGH
EGEVYCCKFHPNGATLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEIHYNTDGSMLF
SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA
AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLMYTMRGHTDSVTGLSLSS
EGSYLLSNAMDNTVRIWDVRPFAPKERCVKVLQGNVHNFEKNLLRCSWSPDGSKIAAGSA
DRFVYVWDTTSRRILYKLPGHAGSINEITFHPDEPIILSASSDKRLYMGEIQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctggacccgcagaaacggaaggcgcctacggacttggccttggtggtggcggcgaag
aagccccgccaagaggccgccggggctggccctccatcggggcccccgggcgccctgttg
cccgcgggccctccaagatgttcctctctccaggcacccataatgctgctttcagggcat
gaaggagaggtttactgttgtaagtttcatcctaacggagcaactttggcatcagcagga
tttgacaggttgatcttgctatggaatgtatatggcgattgtgataattatgccactctg
aaaggacatagtggagcagttatggaaatacattacaacactgatggcagcatgctattc
tctgcttccacggataaaacagtagccgtatgggatagtgaaacgggagagagagtgaaa
agactcaaaggacacacatcatttgtgaactcctgttacccagcaagacgtggacctcag
ttggtttgtacaggcagtgatgatggaacagtaaagttgtgggacatcagaaaaaaggct
gctattcaaacatttcaaaacacctatcaagttttagcagtgactttcaatgatacaagt
gatcaaataatatctggaggcatagacaatgacatcaaggtatgggaccttcgtcaaaac
aagttgatgtatacaatgagaggacatacagattctgtcacaggtctcagcctcagctca
gaagggtcttacttgctttccaatgcaatggacaatacagttcgcatatgggacgttcga
ccttttgctcctaaagagagatgtgtgaaagtactccaagggaatgtacacaattttgag
aagaatcttctgcgctgttcttggtcaccagatgggagtaaaatagctgctggatctgca
gacaggtttgtttatgtgtgggatactacatcgagaagaatcttgtacaagcttcccggc
cacgctggttcaataaatgaaataactttccatccggatgaacccattatcctttctgcc
tctagtgacaaaagactgtatatgggagaaatccagtga
DBGET
integrated database retrieval system
