Anolis sagrei ordinatus (Brown anole): 132782857
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Entry
132782857 CDS
T09595
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132782857 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asao03019
]
132782857 (EDC4)
Messenger RNA biogenesis [BR:
asao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132782857 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
132782857 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
NBCH_WD40
WDR55
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
132782857
NCBI-ProteinID:
XP_060643783
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MASASIDIEDATQHLRDILKLDRPAGSVNENQRASSSYNGDLNGLLVPDPIASGDGVSLA
KPLPQTVPLGALQEKQVICLSGDDSSTGMVITAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNAYLAYAIRGASNGSAMVRVLSVSTAERTLLKGFTGGVADL
AFAHLNSNQLACLDEAGNLFVWRMAMENGKIQEEILENIKRPDGTPLNSFRRIIWCPFIP
DENEDGCEEGSQTLALLHEDRAEVWDLDIIRANHNSWPVEVTNIKEGFIVVKGHRTCLSE
GALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGKPLSCLLFCDNHKKQDP
EVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSVLPSLKACLDLSAEYLI
LSDVQRKVLYVMELVQNQEEGKAFFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ESEGLSSEGTPGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDAAAPMPAHGSHE
DFAFPDHLADLGAEGLGSERGSVHGSQPDLHRISELSVPVDFLSPSSDSKPKLMTPDAFM
TPSTSLQQITVSPGSSMSSLTAVTSMSSSSVGEPPVPRLPEEVSPSPKMQLDAGLGLSGG
SGNLQGSPRSHSVLLPGLPDRLTPKAPISISPENASHALERQEVEPLVVPQSSPTRERSP
DVISSASTAMSQDIPEIASETLQRSFAAAAAPPGLPGEGLDPGHHADSMASAASALHLLS
PRNRHSSEHSHHSLDMAPSEVDVLTAPSLLETVLPQETAASDPPGSQPWPAAPDITRETR
NSMADSPRNDVEDKHKGPFHRHSYHLLHESQDANAEQSDHDDEVAGLASAPGGYGAKAAA
QRLPVKDWKAKVSPRASPKRKGKKDDGSRDVTQSPRAFDQQVAPEYQEELISLLRSQQRE
IAELRQNQMELMQRLSDHLDAVQSSLMGHIERVADSQQEQEQRRLDQAIAEGQQRGGQLQ
EHLFQQLSQSISTAACNRLERCIREEMKKTVPPCISKTLDPVTGQLSNTIANKLTAIEGT
LKENVTKLVKSKNLTDAIARAATDSLQGPMQSAYREAFQSVVLPAFEKSCQSMFQQINDT
FKQGTQEYVQQLEAHMKNKKARDQDARDSQLGQLRQLVTTFQSTTDQMASTIAASVHTEV
QHQLHVIVGNMQDSILAQVQRVIKGEVSTAMKEQQAAVTSSIMQAMRSAAGTPIPATHLD
FQSQQAHVLQLLQQGHLNQAFQQALTAADLNLVLYVCEMVDPQQVFGQHPCPLSQPVLLS
LIQQLSSDLGARTELKINYLEEAVMHLDHSDPITRDHMGSVMSQVRQKLFQFLQAEPHNS
LSKPARRLMIMLQGLATPNIS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggccagcatcgacatcgaggatgccacgcagcacctgcgggacatcctcaag
ctggaccggcccgcaggttctgtgaatgaaaaccaaagagcttctagttcgtacaatgga
gacctcaatggtttgttggtaccggatcccatcgcgagcggagacggtgtttccttggcc
aagcctcttccccagacggttcccctgggagcactgcaggagaagcaagtcatctgcctc
tctggagacgatagctccacgggaatggtcatcactgctaaagatgtggagatagttgcc
agcagcgattccagcatcaccagtaaagctcgaggcagcaacaaggtaaaaatccagcca
gtggccagatatgattgggagcagaaatactactatgggaatctgatagctgtgtcaaat
gcctacctggcatacgccattcgaggtgccagcaatggctctgccatggtgcgagtcctg
agtgtcagcacagccgaacggaccctgctgaagggcttcactggcggcgttgcggacttg
gcttttgctcacctcaactccaatcagctggcctgtctcgatgaagctggaaaccttttt
gtctggcgcatggctatggaaaatgggaaaattcaagaagaaattttggagaacatcaag
cgaccggatgggacgcctctgaatagcttcaggaggatcatctggtgccctttcatccct
gacgagaacgaggacggctgcgaagagggcagccaaactctggctctcctgcacgaggac
cgggcagaagtctgggatctcgacataatccgagccaaccataattcctggccggtggaa
gtgactaacatcaaagaaggcttcattgtggtgaaaggtcacagaacgtgcctgagtgaa
ggggccctttcccccgatgggacggtcttggccacggcaagccacgatggctttgtcaag
ttctggcagatctacattgaagggcaggatgagccaaggtgtctccatgagtggaagccg
cacgacggcaagcccctgtcttgcttgctcttctgtgacaaccataagaaacaggaccca
gaagttccgttttggaggttcctcatcacaggagcggaccagaaccgagagctgaaaatg
tggtgcaccgtctcatggacttgtctgcagactgtccgattttcgcccgacatattcagt
tctatgagtgtccttcccagcctgaaggcctgcctggatctttctgctgagtatttgatt
ttgagtgatgtgcagcgaaaggtcttgtatgtgatggaacttgtccagaaccaagaggag
gggaaagccttcttcagctccatctccgagttcctgctgacccatccagtcttaagcttc
ggtatccaggtggtcagccgctgccgactgaggcacacggaagtcctgccagccgaagag
gagagcgagggcctgagttcagaaggcacgccgggcgcaggcgccgtggaatccgcagca
ggagtgctcatcaaactcttctgcgtccacaccaaagccctccaggatgtgcagatccga
ttccagcctcttcacagcccagacgcagctgcgcccatgcctgcccacggctcccacgaa
gactttgcattccccgaccacctggcggacctgggtgcagaaggcctggggtccgagaga
ggatccgtgcacggctcgcagccggacctgcaccgcatttcggagttgtctgtgcctgtg
gacttcctctccccgtccagcgattccaaaccgaagctcatgactccagatgccttcatg
actcccagcacgtctctgcaacagatcacagtctcaccgggaagcagcatgagctccctc
acggccgtcacctccatgagcagttcttccgtgggtgagcctccggttcccaggctgccg
gaagaagtctctccaagtccaaagatgcagctggatgccggcctgggactgagcggcggc
agtgggaacctgcagggaagcccacggagtcattcggtcctcctcccgggtcttcccgac
aggctgaccccaaaggcccccatctcgatctccccggagaacgcctcacacgcgctggag
cggcaagaggtggagcctctggtggtcccccagtcctctcccacccgcgagcgctccccg
gacgtcatttcctccgcctccacggccatgtcgcaggacatccccgagatcgcctcagag
actctgcagcgcagctttgccgccgccgcagcccctcccgggctccccggggagggcctg
gaccccggccaccacgccgacagcatggcctccgcagcctccgccttgcacttgctctcc
ccccgcaaccggcacagctccgagcacagccaccactccttggacatggctcccagtgaa
gtggacgtgctgaccgctccctccctgctggagaccgtcctgcctcaggaaacggccgct
tcggaccctccgggcagccagccctggcctgccgctcccgacatcaccagagaaaccagg
aacagcatggcagacagccccaggaatgacgtggaagacaagcacaagggccctttccac
aggcacagctaccacctgctgcacgagagtcaagatgccaacgccgagcaaagtgaccat
gatgatgaggtggcaggcttggcctctgcgcccggcggatacggggccaaagcagctgcc
cagaggctgccggtcaaggactggaaagccaaggtctctccgcgagcctctccgaagagg
aaagggaagaaggatgatggttccagggatgtcacccagtccccaagagcctttgatcag
caggtggcccccgagtaccaggaggagctgatctcgctgctgaggagccagcagagggaa
attgctgagctgaggcagaaccaaatggagctgatgcagaggttgagcgaccacttggat
gccgtgcagagctccctcatgggccacatcgagcgcgtggcggattcccagcaggagcag
gaacagcgtcggctggaccaggccatcgcagaggggcagcagcgtggcggtcagctgcag
gagcatctcttccagcagctctcccagtccatctccacggccgcgtgcaatcggctggaa
aggtgcatccgcgaggagatgaagaagacggtgcctccctgcatttccaagaccttggat
cctgtcaccgggcagctgagcaacaccattgcaaacaagctgacggccattgaagggaca
ctgaaggagaatgtcaccaaactcgtgaaatcaaagaacctaacggatgcgattgcccgg
gccgcgacggattccttgcaagggccgatgcagtctgcgtaccgggaagcatttcagagc
gtggtgctgcctgcttttgagaagagctgccagtcgatgttccagcaaatcaacgacacc
ttcaagcaaggcacgcaagaatatgttcagcagttggaggctcatatgaagaacaagaag
gcccgggaccaggatgcccgggactcgcagctgggccagctccgacagctggtcaccacc
tttcagagcaccacggaccaaatggcctccaccattgcggcgagtgtgcacaccgaggtg
caacatcagctccatgtgatcgtgggcaacatgcaggactccatcctggctcaggtgcag
cgtgtgatcaagggcgaagtgagcacggccatgaaggagcagcaggcggcggtcacctcc
agcatcatgcaggccatgcgctctgcggcaggcacccccatccccgccacgcacctggac
tttcagtcccagcaagcgcatgtgctgcaactgctgcaacagggacacctgaatcaagcc
ttccagcaggctctcactgcggcagatttgaacctggtcctctatgtctgtgagatggtt
gaccctcagcaagtgtttgggcagcacccctgcccgctctcccagcccgtcctcctctcc
ctcatccagcaactctcttccgacttaggagcccggacagaacttaagatcaattacctg
gaggaggcggtgatgcacctggaccacagcgaccccatcacgcgtgaccacatgggctcc
gtgatgagccaggtgcggcagaagctcttccagttcctgcaggccgagcctcacaacagc
ctgagcaagcccgcccgccggctcatgatcatgctccaaggcctggccacgcccaacatc
tcctaa
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integrated database retrieval system
