Australozyma saopauloensis: 88171629
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Entry
88171629 CDS
T10743
Symbol
PUMCH_000560
Name
(RefSeq) uncharacterized protein
KO
K12830
splicing factor 3B subunit 3
Organism
asau Australozyma saopauloensis
Pathway
asau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
88171629 (PUMCH_000560)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asau03021
]
88171629 (PUMCH_000560)
03041 Spliceosome [BR:
asau03041
]
88171629 (PUMCH_000560)
03036 Chromosome and associated proteins [BR:
asau03036
]
88171629 (PUMCH_000560)
Transcription machinery [BR:
asau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
88171629 (PUMCH_000560)
Spliceosome [BR:
asau03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
88171629 (PUMCH_000560)
Complex B
88171629 (PUMCH_000560)
Complex C
U2 SnRNP specific factors
88171629 (PUMCH_000560)
Chromosome and associated proteins [BR:
asau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
88171629 (PUMCH_000560)
TFTC complex
88171629 (PUMCH_000560)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
DUF7354
Motif
Other DBs
NCBI-GeneID:
88171629
NCBI-ProteinID:
XP_062875710
UniProt:
A0AAX4H4A7
LinkDB
All DBs
Position
1:complement(1221922..1225545)
Genome browser
AA seq
1207 aa
AA seq
DB search
MLHHPDSLWLYHLTLRLPSNSFASIVGNFSGDKKVQELVLASNTTLEVYRLNTDTGKLDR
FLCQRAFALIQRIDKIRLVGTTKDLLVVTADSGILTVLQLEPTSMRFVPIVQEPHSKNAL
RRLTPGEYLCVEPRGRAILVGAIERDGLAYKVQMDDSKGSLALSSPLTVSTKGILTLSLC
SLDTGFENPMWAAIEIDHLAYENRSYDAESTPLQLAYYEFDQGLNHVVRRKSKHLIPSSA
SSLVAMPGHVGGLVICCGTYLIYEDGPVNSSRLYVPLPIREDSEESTIVCSLLHTLKKTD
FFLLLQTSLGDLIKVTVDYDNEKDMIRSISATYFDTIPICNSINVFKAGYLFANCSDRNK
VMYQFELLGEDNETTQTSVALKDELPEKTKYQPKTLRHLARIDEIESLGPLTDSMLVETL
SKESLDPLKRLVTTSSKSSLKTLDYGLSVSELVSSPLPINPTDIYTAKLLQGAINDQYLV
LSSSLSQKTMVLSIGEVVEEVSDSGLEIDQHTLMVQQIGTNSLVQIHTNGIRNIHHTFDE
ELNVTGRKVTDWFPPAGIQVLQASCNSEQVVVGLSNREIVYFEIDKADDQLLEYQERFEV
SEGSITAIAIATSLLNERRSSFLVVGVSDESIQVLSLQPHNCLEVLTLQALSSNCRSLLL
LPVDKDTLYVHIGMDNGIYVRVSIDPISGKLSDSRLKYLGTKPVQLRSLSLPNMESAAIL
AFSSRPWLGYFNFDKNLKLFPLLNSKISSGASFYSEDIGVESVVGIYNDNMSIFTIGKED
GGGLDYSSDFVTSEVKLRYTPRRLLKSTKKNIYYVLQAEPNIKSPFKDSETADEEQFETF
GYPRHANSWASCIQVVDHNQEEILQTYEFLDNKYAVCMAFAKFGSGVHLVVSATQCGTNQ
SYSMFTFKVDSDHKLQLLYETKTDGPVTALEEFEDKLVAVVGNSIRIYEKGMKHLLRKSS
TTIECLSRVNKIEHLESGLFIVADASSSVIYVSYDATTNHFVPIISDTVSRAVTAFTTLD
TRTVVAGDKFGNIFVNRVPQEAASQISNNVLTQFQDEYLNGPNYRLSKLCDFYIADVPTS
FHKGSFVVGGTESLVYTGIQGTIGIMLPVGTYQEVEFLLNFEKAIRKFYERELDDIEKPS
QRINLVGREHLKFRGYYNPVKNVIDGDLLEKYFELDSGTKIKIGSELGRVPREVERKLYD
LRNRAAF
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgctccatcatccagattcactctggctctaccatctcacgcttcggctgccgtccaat
agctttgcctcgatcgtggggaatttctctggcgataagaaagttcaggaattagttttg
gcctcgaacaccactcttgaagtatatagactaaacacagacacagggaagttggatcga
tttctgtgccagcgagcatttgccttgatccaaaggatagataaaatccggcttgttggc
accaccaaggaccttctcgtagtgaccgcagactcgggtatacttaccgttttgcaactt
gaaccaacgtcgatgcgattcgtgcccattgtgcaagaaccacactccaaaaatgcactt
cgaagactcacgccgggtgagtatttatgtgttgagccccgtgggcgcgcaattctcgtc
ggcgccatcgaaagagacggcttagcgtacaaggtccagatggacgacagcaaagggtct
ttggctctttcatctccgctcacagtttcaacaaagggcatcttgacgctctctctttgc
tcgttggatacgggatttgagaatcccatgtgggccgccatcgaaatcgaccatctggcc
tacgaaaatagatcctacgatgcggaatcgactcctctccagctcgcatactacgaattt
gaccagggtttgaaccatgtagtgcggcgcaaatctaaacacctcattccaagctcggcg
tcctcactcgtagccatgcctggccatgttggtggcttggtaatctgttgtgggacatat
ttgatatacgaggatggacctgtaaactccagccgtctatacgtcccccttccaattaga
gaggactccgaagagtcgacaattgtgtgttccttgctgcataccctcaaaaaaactgac
ttcttccttcttctccagacatcgttgggtgacttgattaaagtgacagtcgactatgac
aatgagaaggatatgatacggtctatatctgctacctacttcgacactattcccatctgc
aacagcataaatgttttcaaggctggatacttgtttgcaaactgctcggacagaaacaag
gtcatgtatcaatttgagctgctcggagaagacaacgagacaactcaaacttcggtggca
ctgaaagacgaacttcccgaaaaaacgaaatatcaaccaaaaacactccgacacctagct
cgtatcgatgaaattgagtccttggggccattgacagatagtatgcttgttgagactctt
tcgaaagagtcactggacccgctcaagcgtcttgtaaccacctcttcgaaatcttcactc
aagactttggactacggtctctcggtctctgagttagtgtcttcgccacttcccatcaat
cctaccgatatttacaccgcaaaacttctgcaaggggctataaatgaccagtacttggta
ctttcgtcttctttgagtcaaaagacgatggttttatcgattggagaggttgtggaagaa
gtcagtgactctggcctagaaattgatcaacacacattgatggtgcaacaaattggtaca
aattcacttgtccagattcacactaacggtattcgtaacattcatcacacatttgacgag
gaacttaatgtcaccggtcgaaaagtcacagactggtttcctcctgctggaattcaagtg
cttcaagcttcgtgcaacagcgagcaagtcgtggtgggcttgtccaatagagaaatcgtt
tattttgagattgacaaggcagatgatcagcttttagagtatcaagagagattcgaagtc
tctgaaggctcgatcaccgccattgccatagccacgagtctattgaacgaacgccgaagc
tcatttttagtcgttggtgtttctgatgagagcatccaagttctctcgttgcaaccacat
aattgcttggaagttttaacccttcaggcgctttcgtctaattgtcgctccttacttttg
ctccccgttgacaaggataccttgtatgtgcatatcggaatggacaatggtatttatgtt
cgtgtcagcattgacccaatttctggtaaattgtcagattcgagacttaagtacctagga
actaagccagttcaattgcggagtttgtcactcccaaatatggagagcgctgcgatattg
gccttcagctcacgaccctggttgggttacttcaattttgacaaaaatctcaagttgttc
ccgcttctaaactccaagatctctagtggtgcttcattttactcagaggatattggtgtt
gagagcgtggttggcatttacaatgataacatgagtatattcaccattggcaaggaagat
ggtggtggtttagactacagttcggactttgtcaccagtgaagtgaagcttcggtatact
ccccgtagattgctcaagtccacaaaaaagaacatctactacgtacttcaagccgaacca
aacatcaagtcgccgttcaaggacagtgagactgctgacgaggaacaatttgaaactttt
gggtatcctagacacgctaattcttgggcctcttgcattcaggtagttgaccataatcaa
gaggagattctccaaacatacgagtttcttgataacaagtacgctgtatgtatggcattc
gccaaatttggctctggagttcaccttgttgtgagtgcaacacaatgcggcacgaaccaa
tcatactcgatgtttaccttcaaagttgattcagatcacaagctccaattgctttatgag
accaaaacagatggcccagtgactgctctcgaagaatttgaagacaaactcgtggcagtt
gttggaaatagtattcgaatctacgagaagggaatgaaacatctattgaggaaatcctcc
accacgatagaatgtttgagtagggtgaacaaaatagagcatttggagtctggactcttc
attgtcgccgatgcctcctcttcagtgatctacgtcagctacgacgctacaacaaatcac
ttcgtacccatcatcagtgacacggtcagtcgtgctgtgacagctttcacaactctcgac
actcgtactgtggtagcaggcgacaagtttggcaacatattcgtgaacagagttccgcaa
gaggctgcatctcagatttctaataatgttttgactcaatttcaagatgagtatctcaac
ggacccaactaccgtctctcgaaactttgtgatttttacatagctgatgttcctacatca
tttcacaaaggttcgttcgtcgtgggtggcacagagagtttggtctacactggtatacaa
ggtacaatcggcattatgttgccggtcggcacctatcaggaggtagaatttctacttaat
ttcgagaaagcaatcagaaagttctatgaaagagaattggatgacattgagaagccaagt
cagcgaatcaatcttgtgggtagagaacatctcaagttcaggggctactacaacccagtg
aaaaacgttatagacggagatttgttggaaaaatatttcgaattggactctggcacaaaa
ataaagataggcagtgaattggggcgggttccgcgcgaggttgaacggaagttgtatgac
ttacgtaatagagcagcattctaa
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