Australozyma saopauloensis: 88172007
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Entry
88172007 CDS
T10743
Symbol
PUMCH_000939
Name
(RefSeq) uncharacterized protein
KO
K10755
replication factor C subunit 2/4
Organism
asau Australozyma saopauloensis
Pathway
asau03030
DNA replication
asau03410
Base excision repair
asau03420
Nucleotide excision repair
asau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
88172007 (PUMCH_000939)
03410 Base excision repair
88172007 (PUMCH_000939)
03420 Nucleotide excision repair
88172007 (PUMCH_000939)
03430 Mismatch repair
88172007 (PUMCH_000939)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asau03032
]
88172007 (PUMCH_000939)
03036 Chromosome and associated proteins [BR:
asau03036
]
88172007 (PUMCH_000939)
03400 DNA repair and recombination proteins [BR:
asau03400
]
88172007 (PUMCH_000939)
DNA replication proteins [BR:
asau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
88172007 (PUMCH_000939)
DNA Replication Termination Factors
ELG1-RFC complex
88172007 (PUMCH_000939)
Chromosome and associated proteins [BR:
asau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
88172007 (PUMCH_000939)
DNA repair and recombination proteins [BR:
asau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
88172007 (PUMCH_000939)
Check point factors
HRAD17(Rad24)-RFC complex
88172007 (PUMCH_000939)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
Rad17
DNA_pol3_delta2
AAA_22
Mg_chelatase
AAA_11
RuvB_N
AAA_16
AAA_5
AAA_14
DNA_pol3_gamma3
AAA_24
AAA_2
SLFN-g3_helicase
DUF815
AAA_7
ResIII
AAA_30
AAA_assoc_2
AAA_28
AAA_19
bpMoxR
RNA_helicase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
88172007
NCBI-ProteinID:
XP_062876083
UniProt:
A0AAX4H6U2
LinkDB
All DBs
Position
1:complement(2167738..2168769)
Genome browser
AA seq
343 aa
AA seq
DB search
MTTQYDQQKLEHTPWVEKYRPKNLDDVASQEHAVRILKKTVLLANLPHMLFYGPPGTGKT
STMLALAKQLYGPRLYKLRVLELNASDERGISIVRLKIKNFARLTVSNPTAEDLRDYPCP
PYKIIILDEADSMTNDAQSALRRTMENYSLVTRFCLICNYITRIIDPLALRCLKFRFKPL
DNANAFARLSLIAEKELVRLDLDAVLEEILVVSKGDLRKAITYLQSAARLGASLLAEHSI
SVNLVREIAGVVEQPLLDALLEAIRSKSSADIMAIVKKVVLEGWSAQQVSDQLHDLLLLD
EGLQSEKKNAIAKLLFETDRRLNSGTDEHVQLLNLLLQIAAVV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagtacgaccaacagaaactcgaacacacgccgtgggtcgaaaaatacaga
ccgaaaaacttggacgatgtcgcctcccaagaacacgcggtccgcatcctcaagaaaaca
gttctgctggcaaacctaccgcacatgctcttctatggacctccaggtaccggtaagaca
tccacaatgttggcattggccaagcagttgtatggcccgcgtttgtacaagctgcgagtg
ttggaattgaacgcgtctgacgagcgtggtatctccattgtgcggctgaagatcaagaac
tttgctcggttaacagtgtcgaacccgaccgcagaggatttgcgcgattatccttgccca
ccatataaaattatcattttggatgaggcagattcgatgaccaacgatgcgcagtccgcg
ttacgtcgtaccatggagaactattcgctggtgacacggttctgtctcatttgtaattac
atcacccgtatcattgacccgcttgcgctgcgttgtctgaagttccgcttcaaaccgctc
gacaacgccaacgcgtttgctcgtttgagtctgattgcagagaaagaactggtgcgcttg
gacctggacgcggttctcgaggagattttggttgtatccaagggtgacttgcgtaaagcc
attacctacttacaatctgccgctcgtttgggtgcgtcgttgctggcggaacactccata
tctgtcaatttggtccgggagattgctggagtggttgagcagccgcttttggacgcgcta
ttagaggcaattcgctcgaaaagctccgcagacattatggccatcgtcaaaaaagttgtg
cttgaaggttggagtgcgcaacaggtctctgaccagcttcatgacttgttgcttctagat
gaaggacttcaatctgaaaagaagaatgccatcgcaaagctcctttttgagacggacaga
agactcaatagtggtacggacgaacatgttcagcttttgaatttgctgttgcaaattgcc
gctgttgtctaa
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