Australozyma saopauloensis: 88172373
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Entry
88172373 CDS
T10743
Symbol
PUMCH_001307
Name
(RefSeq) uncharacterized protein
KO
K11600
exosome complex component RRP41
Organism
asau Australozyma saopauloensis
Pathway
asau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
88172373 (PUMCH_001307)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asau03019
]
88172373 (PUMCH_001307)
Messenger RNA biogenesis [BR:
asau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
88172373 (PUMCH_001307)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
88172373 (PUMCH_001307)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF2000
Motif
Other DBs
NCBI-GeneID:
88172373
NCBI-ProteinID:
XP_062876436
UniProt:
A0AAX4H6H3
LinkDB
All DBs
Position
2:129592..130323
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AA seq
243 aa
AA seq
DB search
MSRLELYSPEGLRVDGRRWNELRRFDCKINTHPAFDGSSYVEQGNSKVICMVRGPMEPPM
RSQVNQTQAVIEMNLNIASFSTLQRRKRSKNDKRMIEMKTTLERTFEQSVMSHLYPRTLI
EVNVQVLAQDGAVLATMTNAITLALIDAGVAMYDYVSAVSVGIHDQTPLLDLNVLEENDM
SCLTIGVVGKSEKLAMLLLEDKMPLDKLENALAVAIAGGHRIRDLMDDEVRSHGNQRVSK
LTS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcttgagctatattcaccagagggcctacgcgttgacggcagaagatggaat
gaactacgtcgttttgactgcaaaattaacacacaccccgcctttgacggctcttcgtac
gtcgaacaaggcaactctaaggtcatatgcatggtcaggggtccaatggagccacccatg
cgctcgcaagtcaatcagacgcaggcggtgattgagatgaatttaaacatagcaagtttc
tcgacgttgcagcgccgaaagagaagcaaaaacgataaacgaatgatcgagatgaagact
acgttagaaagaacatttgagcagagtgttatgtcgcatttgtatcctagaactttgatt
gaggtaaacgtccaggttcttgctcaagatggtgctgttttggcaaccatgaccaatgct
attactttggcgcttatagatgccggtgtggccatgtacgactatgtgtctgctgtcagc
gtaggcattcatgaccagacaccacttctcgatctcaatgtgttggaagaaaatgacatg
agttgtcttactatcggtgttgtcggaaagagtgaaaagttggcgatgttgttattggag
gataaaatgccattggacaaattggagaatgcactcgcggtggcaatagctggtggccat
agaatacgagatttgatggatgacgaggtgagaagccatggtaaccagagagtatctaaa
ctcacgtcgtga
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