Australozyma saopauloensis: 88172495
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Entry
88172495 CDS
T10743
Symbol
PUMCH_001430
Name
(RefSeq) uncharacterized protein
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
asau Australozyma saopauloensis
Pathway
asau03018
RNA degradation
Brite
Enzymes [BR:
asau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
88172495 (PUMCH_001430)
Messenger RNA biogenesis [BR:
asau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
88172495 (PUMCH_001430)
Spliceosome [BR:
asau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
88172495 (PUMCH_001430)
Complex C
U4/U6.U5 tri-SnRNP related factors
88172495 (PUMCH_001430)
Ribosome biogenesis [BR:
asau03009
]
Eukaryotic type
Pre-60S particles
Helicases
88172495 (PUMCH_001430)
Transfer RNA biogenesis [BR:
asau03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
88172495 (PUMCH_001430)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ATG17_like
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
88172495
NCBI-ProteinID:
XP_062876550
UniProt:
A0AAX4H6E8
LinkDB
All DBs
Position
2:417350..420733
Genome browser
AA seq
1127 aa
AA seq
DB search
MTETLLNLSKLQSYTKKLHENHRTKNKTERELDNYSNLNAPLNHWRYGCFTSSTSSHISH
LNLIPHTFNTHRMDEDDIFAVFSETPAVPEKIAVEKPAEESVVPNLDQKSTENGQKRPME
DDSAPTKKQDTTKPSKKKNPIVKDALEIEALREVAASAGLLASAPQESGLKLKHQVRHQV
AIPPDYPYIPIGEHKRENEARTYPFTLDPFQDTAISCIDRNESVLVSAHTSAGKTVVAEY
AIAQSLGHKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVTINPDAGCLVMTTEILR
SMLYRGSEIMREVAWVIFDEVHYMRDKSRGVVWEETIILLPDKVHHVFLSATIPNAMEFA
EWIVKTHNQPCHVVYTDFRPTPLQHYLFPAAGDGIHLVVDEKGTFREENFQKAMASISNN
MGDDPSALESRGKKGQTFKGGNTDSKSDIYKIVKMIYQKRYNPVIVFSFSKRDCESLALK
MSKLDFNNDEERASLTKIFDNAISLLPDADKELPQIKNILPLLRRGIGIHHSGLLPILKE
IIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGKGFRWVSGGEYIQMSGRAG
RRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMLLNLMRVEGISPEFML
ESSFYQFQNAASVPLLEQELAALNEKYKAASFDDEYLIKEYYDLKQQLQNYQKDLRHIIT
HPGHILPFLQPGRVVEVQIGDHYYGWGMVASFTKRTNKRHTSQTFTDHESYIVSVFVHTI
FVDSPVALIKPFNPEFPEGIRPCIGEEKSRAEFIPITLDSIKSISSVRLKVPEDLKSSAS
KRNLVRTLRDLPKKLPDGIPLMNPVESMKIEDPEFKVLLRKIDVLESKLSTNILHGSDRI
EKLYEEFSQKMDIDRQIKEKKESILQAQAVIQLDDLRHRKRVLRKLGFTTENDIIELKGR
VACEISTGDELLLTELIFNGTFNELTPEQCAALLSCFVFQERAKEVPRLKPELQEPLKEM
QDMATKLAKTYKQCKIEIVEKDYVEEFRPELMEVTYAWCKGASFTQICKMTDVYEGSLIR
MFKRLEEMIRQMVLAAKTIGNQELEDKMEKAAELVHRDIVSAGSLYL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacactactaaatttgagcaaacttcaatcttatacaaaaaagctacatgaa
aatcacagaacaaaaaacaaaacggaacgagaattagacaactactccaatttgaacgct
ccactgaaccattggaggtacgggtgtttcacctcatcgacctcatctcacatctcacat
ctgaacttaataccccatacattcaacacccacagaatggacgaagacgacattttcgcc
gttttctcggaaacgcccgcggtgcccgagaaaattgccgttgaaaagcccgctgaggag
tctgtggtgcccaatttggaccagaaatcgaccgaaaatggacaaaagagacccatggaa
gatgattctgcaccaaccaagaagcaggataccacgaaaccttccaaaaagaagaaccct
attgtcaaagatgccttggaaatcgaggctctgcgtgaggtcgcagcttctgccggatta
ttggcttcagcacctcaggaatcaggattgaagttgaagcatcaagtgagacaccaggtt
gccattcctcctgactatccgtacattcctattggtgagcacaagcgtgaaaatgaggcc
agaacataccctttcacattggatccgttccaggacacagccatctcttgtatagacaga
aacgaatctgtgctagtctcggcacacacctccgctggtaagacagtggtggccgaatat
gctattgcccaatcacttggccacaagcagagagttatctatacgtcgcccatcaaggca
ttgagtaatcagaaatacagagagcttttggccgagtttggagatgtgggtctcatgact
ggagatgttaccatcaacccggacgccggctgtttggttatgaccactgagattttgaga
agtatgctttatcgtggttccgagatcatgcgtgaggttgcctgggtcattttcgatgag
gtccattacatgagagacaaatccagaggtgtggtgtgggaagagaccatcattttactc
cctgacaaggtgcatcacgtcttcttgtctgctactatccccaacgccatggaatttgct
gagtggatcgtcaagacccataatcagccatgtcacgtcgtgtataccgatttccgtcca
acgcctttgcagcactatcttttccctgctgctggtgatggtatccatttggttgttgac
gagaagggaaccttccgtgaagagaacttccaaaaggccatggcttctatctcaaataac
atgggtgatgacccttctgctcttgagtccagaggcaagaagggacaaacgttcaagggt
ggaaacaccgacagcaagagcgacatctacaaaattgtcaaaatgatttatcaaaagaga
tacaatcctgtgattgttttctccttctctaagagagactgcgagtctttagcattgaaa
atgtccaaactcgatttcaacaacgacgaagaacgtgcttcgctcaccaaaattttcgac
aatgccatcagtttgcttccggacgcagacaaggagcttcctcaaatcaagaacatttta
ccattgttgcgtagaggtattggtatccatcactcgggtctcttgccaatcttgaaggag
attatcgagattttgttccaagaaggcttccttaaggtcttgtttgctactgaaaccttc
tccattggtctcaatatgcctgcaaagactgttgtcttcacttctgtgcgtaaatgggac
ggaaaagggttccgttgggtctctggtggtgagtacattcaaatgtctggaagagctgga
agaagaggcttggatgacagaggtattgtgatcatgatgatcgatgaaaaaatggaaccc
caagttgctaagggtatggtcaagggtcaagctgatagattggactcggcattccacttg
ggctacaatatgcttttgaacttgatgcgcgtggaaggtatctccccagaattcatgctt
gagagctcattctatcaattccaaaatgctgcctctgtgccgctcttggaacaggagctt
gccgctttgaacgaaaaatacaaggctgcatcttttgatgacgaatatctcatcaaggag
tactatgatctcaaacaacaattgcagaactatcagaaagacttgagacacatcatcaca
cacccgggtcatatcctaccctttttacaaccgggaagagttgttgaggtccaaatcgga
gatcattactatggctggggtatggtagcctcattcaccaaacgtacaaacaagcgtcat
acctcccagacattcaccgaccacgagtcatacattgtgagtgtgtttgttcacacgatc
ttcgttgactcgccagtggctttgatcaaaccattcaatcctgaattcccagagggaatc
cgcccatgcatcggtgaggagaaatcccgtgccgagttcatcccaataaccttggactct
atcaagtctatctctagcgttcgtttgaaggttccagaggacttgaagagctctgcctcc
aagcggaacctcgttcgcacgcttagggatttgcctaagaagttgcccgatggaattcca
ctcatgaacccagtagaaagcatgaagattgaagaccccgaattcaaggttcttttgcgc
aaaatcgacgtgttggaaagtaagctttccaccaacatcttacatggctccgacaggatc
gagaagctttacgaggaattctcccagaaaatggacatcgacagacagatcaaggagaaa
aaggagagcatcttacaggcacaggcggtcatccagctcgacgacttgagacaccgcaag
cgtgttcttcgtaagctaggattcaccacagaaaatgacatcattgagttgaagggccgt
gttgcgtgtgagatctccacaggagacgagcttttgcttacagagcttattttcaacggt
actttcaacgagctcacgcctgagcagtgtgcagctcttctctcctgcttcgttttccaa
gagagggctaaagaggtgcctagactcaagccagagctccaggagccattgaaggagatg
caagatatggccaccaagcttgcgaagacatacaagcagtgcaagatcgagattgttgag
aaggactacgtggaggagttccgccccgagcttatggaggttacctatgcttggtgtaag
ggcgcttctttcacccagatctgtaagatgactgatgtgtacgagggatcccttattcgt
atgttcaagcgtttggaggagatgatcagacagatggttctggccgctaaaacgatcgga
aaccaggagcttgaggataagatggagaaggctgccgagttggttcacagagacattgtg
tctgctggctcgttatacttgtaa
DBGET
integrated database retrieval system
