Australozyma saopauloensis: 88172840
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Entry
88172840 CDS
T10743
Symbol
PUMCH_001775
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
asau Australozyma saopauloensis
Pathway
asau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
88172840 (PUMCH_001775)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asau03041
]
88172840 (PUMCH_001775)
Spliceosome [BR:
asau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
88172840 (PUMCH_001775)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Ge1_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_SPT8
WD_LRWD1
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
RMC1_N
Motif
Other DBs
NCBI-GeneID:
88172840
NCBI-ProteinID:
XP_062876884
UniProt:
A0AAX4H8F1
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Position
2:1278880..1280169
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AA seq
429 aa
AA seq
DB search
MSALQSPSTSTLQTTDQVANMNSRDIGKIISEEDQEDEEEDEEFYTPGSNELFEARKKLL
ASSVSKAAERIEKQTQLAKEFNMARTLRHRHIIALYMELLELDASYTMKGNTRALGMARF
NKDSTRVACASWDGSIFILDRKDTVLNQVLRLSPGFHTEKAVVEWSPSDSLFLISGGAEG
SVNFWKVDDLEIMKPTETLKRAHSNRIAHITYHPSGEYFATTSFDQTWKLWDVQRPEIEL
LEQEGHSKEVYAASFHPDGSLLATGGLDAIGRVWDLRSGRSIAVLSKHAKGIYSMDWSPN
GYHLASASGDNSVQIWDLRKSQDQALFSIPAHTKLVSGVRFLRNCTRNIITKPVRDENEN
DERVLEVNGTVLITSSFDGTVKVWSADNWVCLKTLRGHNDKVMSCDMSTDGDSIISTGWD
RTLKTWIPS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctctacagtctccaagcacaagcacactacaaacgacagatcaagtcgctaat
atgaacagcagagacataggtaagattatttccgaggaggatcaggaagatgaagaggaa
gatgaagaattctatacccctggctcgaatgagctcttcgaggcaaggaaaaagcttcta
gcgtcttcggtttccaaagcggcagaacgaatagagaagcagacccaattggcaaaagaa
ttcaacatggcacgaactctcaggcatcgccacatcatagctctgtacatggagctgttg
gagctcgatgcctcgtatactatgaagggaaataccagggcacttggcatggctagattc
aataaggacagcactcgtgtggcatgcgcatcctgggacggtagcatattcattttggat
cgcaaagacactgtattaaatcaggtgctgcggctgagcccaggttttcataccgagaag
gcggtcgttgagtggagcccatctgacagcctgttcttgatctcgggtggtgctgagggt
agcgtgaatttttggaaggtggatgatctggagattatgaaacccacagaaacattaaaa
cgtgcgcactcaaatcgtattgcacacataacatatcatccaagtggggagtacttcgca
acgacttcgtttgaccaaacatggaagctatgggatgtgcaaagacctgaaatcgagtta
ttggaacaagagggacattccaaagaggtgtatgctgcatcttttcatccggacgggagt
cttctagcgaccggtggtctcgatgcgattggacgtgtgtgggacctaagaagcggaaga
tctattgctgttttgagcaaacacgcgaaaggaatctatagcatggattggtcaccaaat
ggctaccatttagcatcagctagcggagacaactcggtccaaatttgggatttgcgtaaa
tctcaggaccaggccttgttttctattccagcccataccaaattggtgagtggagtgaga
tttcttcggaattgcactcgtaacatcatcacaaaacctgttcgcgacgaaaatgagaac
gacgaacgtgttctagaggtcaacggaacagtgcttatcacctcgtcgtttgatggaact
gtgaaagtatggtctgcggataattgggtttgcttgaagacgttacgtgggcacaatgat
aaagtaatgagttgtgatatgagtacagacggtgatagcataatcagcacaggttgggat
cgtacactaaagacgtggataccgagctaa
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