KEGG   Australozyma saopauloensis: 88173618
Entry
88173618          CDS       T10743                                 
Symbol
PUMCH_002553
Name
(RefSeq) uncharacterized protein
  KO
K14962  COMPASS component SWD2
Organism
asau  Australozyma saopauloensis
Pathway
asau03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:asau00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    88173618 (PUMCH_002553)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asau03019]
    88173618 (PUMCH_002553)
   03036 Chromosome and associated proteins [BR:asau03036]
    88173618 (PUMCH_002553)
Messenger RNA biogenesis [BR:asau03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     88173618 (PUMCH_002553)
Chromosome and associated proteins [BR:asau03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     88173618 (PUMCH_002553)
    COMPASS/SET1 complex (yeast)
     88173618 (PUMCH_002553)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I WD40_Gbeta WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st DSE1_N Beta-prop_WDR35_TULP_N ASA1
Other DBs
NCBI-GeneID: 88173618
NCBI-ProteinID: XP_062877629
UniProt: A0AAX4H9X9
LinkDB
Position
3:855539..856576
AA seq 345 aa
MSVSKKVTTTVPITDAIVATFQPSKALAGHDGASITSLDFDDSGQYLVSAGVDKSIQVYD
CYKGTRHIEVPSQKYGAHLAKFTHSYECLYASTPLVGTADPDHSIRYLALSTKSYLRYFK
GHKDQVLQLEVNPVSDQFITSSADHTVKNWDLRLSAPTGSIGVSSACIVASDPRGIVFAT
AATVDGSKGTVSFYDGAAYEKGPFLVSEIPAGGEKWTKLEFSNNGRYLLIGTDSYKHYVL
DAILGKLLTNLVVQGLRSWPALDYSTTGCVCFTPDGKLVMAGMSNGNISVFDLLVLKAST
EKVDLRPYTILRSDATAAKILAFNPKLLTFASADDQVVLWSTNHE
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtctgtatcgaaaaaagtgaccacgacggttcccatcacagacgccattgtagccacc
ttccagccctcaaaagcactcgcgggccacgacggcgcctccatcacatccttggatttc
gacgattccggccaataccttgtttccgccggcgtagacaagtctatccaggtatacgac
tgctacaagggaacgcgccatatcgaggttccctcgcagaagtacggcgcccatcttgcc
aaattcacacattcgtacgaatgcctatatgcgtctacgcctctggtgggcaccgccgat
ccggatcactcgattcggtacttggcattgtccaccaaaagctatctacgctactttaaa
ggccacaaggaccaggtgctccagttggaggtcaatcctgtttctgaccagttcattacc
tcttcggcagaccacacggtgaagaattgggacctccgcttgtctgctccaacgggaagt
attggtgtaagttctgcctgtattgtcgccagtgatcctagaggcattgtatttgcaact
gcagcaaccgtagatggtagtaaaggcacagtctccttctatgacggcgccgcgtacgaa
aaagggccttttttggtttctgagatccctgcgggcggagagaagtggaccaagttggag
ttttccaacaatggccgatacctcctcatcggcaccgattcctacaagcactacgtgttg
gacgccattctggggaagcttcttacaaatctcgtggtgcagggtctgagatcatggcct
gctctagattactcgaccaccggatgtgtgtgcttcactccggacggaaagctcgtgatg
gcaggaatgtccaacggcaacatctctgtgtttgatcttctggttctcaaggcttccacc
gaaaaggttgacttgcgaccctatacgattttgcggtccgacgctacggcggccaagatc
ttagccttcaatccaaagctcctaacgttcgcgtccgctgacgatcaagtggtgctctgg
tctacgaatcatgagtaa

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