Australozyma saopauloensis: 88175034
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Entry
88175034 CDS
T10743
Symbol
PUMCH_003971
Name
(RefSeq) uncharacterized protein
KO
K15172
transcription elongation factor SPT5
Organism
asau Australozyma saopauloensis
Pathway
asau03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
88175034 (PUMCH_003971)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asau03021
]
88175034 (PUMCH_003971)
03019 Messenger RNA biogenesis [BR:
asau03019
]
88175034 (PUMCH_003971)
Transcription machinery [BR:
asau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
88175034 (PUMCH_003971)
RNA polymerase I system
88175034 (PUMCH_003971)
Messenger RNA biogenesis [BR:
asau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
88175034 (PUMCH_003971)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
Spt5-NGN
Spt5_N
KOW4_SPT5
KOWx_SPT5
KOW5_SPT5
KOW
KOW2_Spt5
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
88175034
NCBI-ProteinID:
XP_062878994
UniProt:
A0AAX4HDJ5
LinkDB
All DBs
Position
5:complement(182734..185739)
Genome browser
AA seq
1001 aa
AA seq
DB search
MSDTGIHSANESGDSTPLNVKREREDEGSPQPSKSHKPNDVSDEDESADKELAAATAAKV
ESLDSAAPAGADEGQQEEENENENENENDENEDDEDDDDDEEDDDDDNVGSSKKSKRRRA
NQFLDIEAEVDDEEEDELDEDDEEAELLREQFISDDPNEREANIPGHDDDRLHRQYDQRR
QEAEDQDAEQLAETLKQRYRKTHTVYRGDTAASGLVSQKLLMPSINDPAIFAIRCTPGRE
KELVRKLYEKKRTLARLGRPLEVLSVFQRDAFKGYIYIEAKKPEAIQQALTGMVNVYANQ
RIIVPVSEYPDLLKQVKSTDVEIVPGIYVRITRGKYKNDLAIVDNLSENGLEVRCKLVPR
LDYGKNDETTYDGKVIKLKIRPMPNLFNEQEARTYDQEGLQTGRGLRSYIYRGDEYQDGF
LFKDFKLQYIQTKDIHPRLDELDLFQSGSRTGDGMDLANVAATLKNSKTQDGGQSSAFQP
GDNVEIRRGEQAKTVGKVVGVSLNEVTIVVVDAGDKQMINREITVTSGDLRKVFALGDHV
KVIEGKHTDRTGLVIRLDGDSVVLLSDQTREDIRVFANYLIKATDSSTSADMVNSMYEIK
DLVQLNASTFGVIVKAETGFYGILTSDGRVVDVKPTGISRKLKLSSREQVATDKHGLTIK
VGDSVKEKGGDKKKEGTILHIYKNILFIESRELTENLGIFATNALNVSTVSTKDLIMSRN
LGPDLSRMNPNLKLAPIAAQATKMRVGGRDKLINKDVVINSGNHKGLMGKVIETDDVDAR
IELHTKAKKIKVNKTKLSVLIRGESIPYLRFIGASETGGRGAHLSLGPAFSSGGRSVLGG
ATPAVGGGAASAWQGKTPSTSAGATSSWGSSGGSSAWGSSGATSTWGATGGNSTWGASNN
SGAGSSWDASRQGGNLAWGRTGGDSSAWGKSGRASVWGDGKNSAWGRNNEGNNSAWGSNN
KQGGNSSWGAQKDNSSGWGDNNTGNRNVWRGNGGGSSWGQQ
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacacgggtatacattctgcgaacgagtcaggtgactccacgccactcaacgtc
aagcgtgagagggaagatgagggatcaccccaaccttcaaaaagtcataaaccaaacgat
gtctcggacgaagatgaatcggccgataaagagctggctgctgccactgctgccaaggtt
gaaagtctggactctgctgctccagccggtgccgatgagggacaacaagaagaagaaaac
gagaatgagaacgagaacgaaaacgacgagaacgaggatgatgaagatgacgacgacgac
gaagaagatgacgatgatgataatgtaggatcctctaaaaaatctaaaagaagaagagcc
aaccagttccttgatatcgaggccgaggtggatgatgaggaagaagatgaactcgacgag
gacgatgaggaggcagagcttttgcgtgaacaattcatttccgacgaccccaacgagcgc
gaggcaaatatcccgggccacgacgatgaccgtttgcatagacaatatgatcaaagacgt
caagaggctgaggatcaagatgctgagcaattggccgagaccttgaagcagcgttacaga
aaaacacatactgtctaccgtggtgacactgctgccagtggtcttgtatcccaaaagttg
ttgatgccctccatcaatgaccctgccattttcgccatccgatgcactccaggtcgtgag
aaggagctcgtgagaaagttgtacgagaagaaacgtactttggctcgtctgggtcgccct
ctcgaagttttgtcggtgttccaaagagacgcctttaagggttacatctatattgaggca
aagaagcctgaggctatccaacaggcgttgaccggtatggtcaatgtctatgccaaccag
agaatcattgtgcctgtgagtgaatatcccgacttgcttaagcaggtgaagtccacagat
gttgagattgtgccaggtatttacgtcagaatcacaagaggaaagtacaagaacgatttg
gccattgtcgataatttatctgagaacggtttggaggtccgctgtaagttggtcccacgt
cttgactacggcaaaaatgacgaaacgacatatgatggtaaggtcatcaaactgaaaatc
agacctatgcccaaccttttcaacgagcaagaagccagaacctatgatcaagaaggtttg
caaactggaagaggcttgcgttcctacatctacagaggtgacgaataccaggatggtttc
cttttcaaggacttcaagttgcagtacatacaaacaaaggacatccaccctcgtctagat
gagttggacttgttccagagtggttccagaactggcgacggtatggatctcgctaacgtt
gcagccactttgaagaacagtaaaactcaagatggtggccaaagcagtgcttttcaacca
ggtgataatgttgagatccgtcgtggtgagcaagctaagactgttggtaaggtggtgggt
gtatcgttgaatgaagtcaccattgttgttgtcgatgccggtgacaaacagatgattaat
cgtgaaattacagtcactagcggtgatttacgtaaggtctttgcccttggtgatcacgtt
aaagtcatagagggtaagcacactgaccgaactggtttggtcataagacttgatggtgac
tctgtggttttgctcagtgatcaaacaagagaagatattcgtgttttcgctaactacctt
attaaggctacagactcttccacgagtgcggatatggtcaacagtatgtatgaaatcaag
gatctcgtgcagctaaatgcatctacattcggtgtcattgtcaaggctgagactgggttc
tacggtattcttacctctgatggccgtgtcgtggatgtgaaacctacaggtatctccaga
aagctcaaactctcaagcagagagcaagtggctactgataagcatggtctgaccatcaaa
gttggagactctgtcaaggagaaaggaggagacaagaagaaagagggtacaattctccat
atttacaagaacattctcttcatcgaatctcgtgagttgaccgaaaatctcggtatattc
gccactaatgctcttaatgtgagcacagtctcgaccaaagatctgattatgtcccgtaat
ctaggtcctgatctcagtcgcatgaaccccaaccttaagctcgctccaatcgctgcgcaa
gcaacgaaaatgcgcgttggaggtagagacaaattgatcaacaaggatgttgttatcaat
agtggaaaccacaagggtcttatgggtaaagtcattgaaaccgacgatgtcgacgcacgt
atcgagctccatacgaaggcaaagaagatcaaggtcaacaagaccaagttgagtgtgtta
attcgtggagaatccattccttatttgcgcttcatcggggcttcggaaaccggtggcaga
ggagcacatttgtctctgggtccagctttctcatcgggtggccgctctgtattgggaggc
gcaactccagccgtgggcggaggtgctgcatcggcatggcaaggaaaaacaccttcaacc
agcgccggcgccacctctagttggggctctagtggaggatcatccgcatggggctctagt
ggtgctacttccacttggggtgccactggaggtaactcaacatggggtgctagcaacaac
tcgggtgctgggtcttcgtgggacgcttcaagacaaggaggcaacctggcttggggacgt
accggaggcgactcctcggcttggggtaaatccggcagagcctcggtgtggggcgacgga
aagaactctgcttggggccgcaacaacgaaggcaacaactcggcgtggggctcgaacaac
aaacaaggaggcaactcgtcgtggggtgcccagaaagataactcttccgggtggggagat
aataatactggcaacagaaatgtttggcgtggaaacggaggtgggtcgtcgtggggccag
cagtag
DBGET
integrated database retrieval system
