Australozyma saopauloensis: 88175040
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Entry
88175040 CDS
T10743
Symbol
PUMCH_003977
Name
(RefSeq) uncharacterized protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
asau Australozyma saopauloensis
Pathway
asau03013
Nucleocytoplasmic transport
asau03015
mRNA surveillance pathway
asau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
88175040 (PUMCH_003977)
09122 Translation
03013 Nucleocytoplasmic transport
88175040 (PUMCH_003977)
03015 mRNA surveillance pathway
88175040 (PUMCH_003977)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asau03019
]
88175040 (PUMCH_003977)
03041 Spliceosome [BR:
asau03041
]
88175040 (PUMCH_003977)
Enzymes [BR:
asau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
88175040 (PUMCH_003977)
Messenger RNA biogenesis [BR:
asau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
88175040 (PUMCH_003977)
Spliceosome [BR:
asau03041
]
Complex C
Other components
EJC/TREX
88175040 (PUMCH_003977)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
88175040 (PUMCH_003977)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
88175040
NCBI-ProteinID:
XP_062879000
UniProt:
A0AAX4HDV3
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All DBs
Position
5:198785..199657
Genome browser
AA seq
290 aa
AA seq
DB search
MPDVKTDVFYGGTPIARDLEKLKNKETCPHIVVATPGRLHALVKEKGIRLNNVKSFVIDE
CDKVLESLDMRRDVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQTPLEIYVDDEAKL
TLHGLQQYYLKLQEAEKNKKLADLLDSLEFNQVIIFVRSTQRAVELNKLLCACNFPSIAV
HSGLKQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPAEADQYLHRVGR
AGRFGTKGLAVSFVSSKEDEEVLEKIQSRFDVKVTEFPEEGVDPSTYMNT
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgtcaagaccgatgtcttctacggtggtactccaatcgctagagacttggag
aagttgaagaacaaagagacctgtcctcacattgtagtcgctactcccggtagattgcac
gctctcgtgaaggagaagggcattcgtttgaacaacgtcaagtccttcgtcatcgatgag
tgtgacaaggtcttggagtccttggacatgagaagagatgtccaagacatcttcagaaac
acccctcaccagaagcaagtgatgatgttctcggccactttgtcccaagagatccgtcct
gtttgtaagaagttcatgcaaaccccattggagatttacgtcgacgatgaggccaagttg
accttgcacggtttgcaacaatactacctcaaattgcaagaggccgagaagaacaagaag
ttggctgacttgttggactccttggagttcaaccaggtcatcatcttcgtcagatctacc
cagagagctgttgagttgaacaagttgttgtgtgcttgtaacttcccatccattgctgtc
cactccggtttgaagcaagaggagagaatcgccagatacaagtcctttaaggagttcaac
aagcgtatctgtgtctccaccgatgtcttcggtagaggtatcgatatcgagcgtatcaac
ttggccatcaactacgacttgcctgctgaggccgaccagtacttgcacagagtcggtaga
gctggtagattcggtaccaagggtttggccgtctcctttgtctcttccaaggaggacgag
gaagttttggagaagatccagtctagattcgacgtcaaggtcaccgagttccctgaggag
ggtgtcgatccatccacctacatgaacacctaa
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