KEGG   Australozyma saopauloensis: 88175040
Entry
88175040          CDS       T10743                                 
Symbol
PUMCH_003977
Name
(RefSeq) uncharacterized protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
asau  Australozyma saopauloensis
Pathway
asau03013  Nucleocytoplasmic transport
asau03015  mRNA surveillance pathway
asau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:asau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    88175040 (PUMCH_003977)
  09122 Translation
   03013 Nucleocytoplasmic transport
    88175040 (PUMCH_003977)
   03015 mRNA surveillance pathway
    88175040 (PUMCH_003977)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asau03019]
    88175040 (PUMCH_003977)
   03041 Spliceosome [BR:asau03041]
    88175040 (PUMCH_003977)
Enzymes [BR:asau01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     88175040 (PUMCH_003977)
Messenger RNA biogenesis [BR:asau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     88175040 (PUMCH_003977)
Spliceosome [BR:asau03041]
 Complex C
  Other components
   EJC/TREX
    88175040 (PUMCH_003977)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    88175040 (PUMCH_003977)
SSDB
Motif
Pfam: Helicase_C DEAD Cas3-like_C_2
Other DBs
NCBI-GeneID: 88175040
NCBI-ProteinID: XP_062879000
UniProt: A0AAX4HDV3
LinkDB
Position
5:198785..199657
AA seq 290 aa
MPDVKTDVFYGGTPIARDLEKLKNKETCPHIVVATPGRLHALVKEKGIRLNNVKSFVIDE
CDKVLESLDMRRDVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQTPLEIYVDDEAKL
TLHGLQQYYLKLQEAEKNKKLADLLDSLEFNQVIIFVRSTQRAVELNKLLCACNFPSIAV
HSGLKQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPAEADQYLHRVGR
AGRFGTKGLAVSFVSSKEDEEVLEKIQSRFDVKVTEFPEEGVDPSTYMNT
NT seq 873 nt   +upstreamnt  +downstreamnt
atgcctgacgtcaagaccgatgtcttctacggtggtactccaatcgctagagacttggag
aagttgaagaacaaagagacctgtcctcacattgtagtcgctactcccggtagattgcac
gctctcgtgaaggagaagggcattcgtttgaacaacgtcaagtccttcgtcatcgatgag
tgtgacaaggtcttggagtccttggacatgagaagagatgtccaagacatcttcagaaac
acccctcaccagaagcaagtgatgatgttctcggccactttgtcccaagagatccgtcct
gtttgtaagaagttcatgcaaaccccattggagatttacgtcgacgatgaggccaagttg
accttgcacggtttgcaacaatactacctcaaattgcaagaggccgagaagaacaagaag
ttggctgacttgttggactccttggagttcaaccaggtcatcatcttcgtcagatctacc
cagagagctgttgagttgaacaagttgttgtgtgcttgtaacttcccatccattgctgtc
cactccggtttgaagcaagaggagagaatcgccagatacaagtcctttaaggagttcaac
aagcgtatctgtgtctccaccgatgtcttcggtagaggtatcgatatcgagcgtatcaac
ttggccatcaactacgacttgcctgctgaggccgaccagtacttgcacagagtcggtaga
gctggtagattcggtaccaagggtttggccgtctcctttgtctcttccaaggaggacgag
gaagttttggagaagatccagtctagattcgacgtcaaggtcaccgagttccctgaggag
ggtgtcgatccatccacctacatgaacacctaa

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