Australozyma saopauloensis: 88175246
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Entry
88175246 CDS
T10743
Symbol
PUMCH_004185
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
asau Australozyma saopauloensis
Pathway
asau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
88175246 (PUMCH_004185)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asau03019
]
88175246 (PUMCH_004185)
03041 Spliceosome [BR:
asau03041
]
88175246 (PUMCH_004185)
Messenger RNA biogenesis [BR:
asau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
88175246 (PUMCH_004185)
Spliceosome [BR:
asau03041
]
Complex B
Other components
Prp19-related factors
88175246 (PUMCH_004185)
Complex C
88175246 (PUMCH_004185)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_M
TPR_14
Suf
NRDE-2
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
88175246
NCBI-ProteinID:
XP_062879202
UniProt:
A0AAX4HE80
LinkDB
All DBs
Position
5:672174..674531
Genome browser
AA seq
785 aa
AA seq
DB search
MDLDTLILEASVAFEEALLKNLENESLWLDYYQANESSLERSIFILDRAVSSLPASYTLW
NVYLLLPWGEEDGDILLQLYQRALQTLNSEPGIWLRYLQLVKSKKDFSAYGSALDLALNN
LHASHHADLWKSYLGVANSKRGSFGANVYKRVFQIQATQRNPFPVDRCECVLKVAQFGDL
NSALTLYSQIPRNEIKNAEQDSYFVSIFLDLLISHGSFADHDYLERIALDAALDLPEKKA
KFVLKIAMYYEKRLVFNKARHYFNLALLQATNMKALALTFEQYTDFLEHEIISLKSKNLI
DEAEMKLRLYENFVEQQKILANDMLLRTEPNNVDLWLDRAEIFRGEKKTNEIIASLVTAI
KSVNPLEAHSRKGKSLADIWSCYANLYISLGDNNTARLIYSRAVKSQYKSADELANIYIM
WSELALESSDDEALEIVEQVLYTIPSNASEIEVDDISRPIQERVFKSVHLWSFYIDLLTS
MSHEDKLTKKLRSAYEAMMSLGVITLRLVFQYADFVLAQKDYAGAYSIYELSISKFNSPT
PCFKIWMAYLEKIVSVEKEESKILDVFDRCLASNLPGHLIADVFKMYSQFLQTRGSLAKS
IKILSQAVERLSQAYSQKTMSTENAYKVVDDKYEIYLILFDSISLKLKDVDLLRSTITNA
VQDTQLSLPMVIELSLKYARFELDLGEIGRARALLKHASSLAHPSSRLMEPVWKEWTEFE
ARNGTEYTYKDMLSFKRVVANEFEALQDYSSEINPMGFVKADTIQKVEAIQATQDPNAIE
LDMDM
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggacttggacactcttattctcgaagcgagtgtcgcctttgaagaggcgctactcaag
aatcttgagaacgagtctctttggctagactactaccaagccaatgaaagcagtctagaa
agaagtatctttattttggatcgtgcagtttccagtctccctgcctcctatacattatgg
aacgtgtatctcctgctaccctggggtgaagaagatggagatatcctactacagttgtat
caaagggcactacagacgctcaatagtgagcccggaatatggctacgctaccttcaatta
gttaaatcaaagaaggacttttctgcttacggcagcgcactagacttggcactaaacaat
ttgcatgctagtcatcatgccgacctatggaaatcctaccttggagtggccaactctaag
cgtggaagttttggagccaatgtgtataagcgagtctttcagatccaagctactcagaga
aatccttttcctgttgataggtgtgaatgtgtgctcaaggtggctcaatttggtgatctc
aacagcgcattgacgctttactcgcagattccaagaaacgaaatcaagaatgccgaacag
gactcttattttgttagcatatttcttgaccttttgatctctcacggttcgtttgctgat
catgactatctcgagcgtatagctcttgatgctgctttggacttaccagagaagaaagca
aaatttgttttgaaaatagctatgtactatgaaaagaggttggtgtttaataaagctcgc
cactacttcaatcttgctttgcttcaggcaacaaatatgaaggcactcgcactcacattc
gagcaatacaccgactttcttgagcacgaaattatttctctcaaatccaagaatctaatt
gatgaagcagagatgaaactcagactctacgaaaattttgtcgagcaacaaaaaatttta
gccaacgacatgcttttacgaacagagcccaataacgttgacttatggttagaccgggct
gaaatcttcagaggtgaaaagaaaacgaacgaaattattgcttctcttgttactgctatc
aaaagtgtgaacccgttagaagcacactcgcgaaagggaaagtctctagctgatatatgg
agttgttatgccaatttgtacatatccctgggtgacaacaacacagctcgtttaatttac
tcgagagctgtaaaatctcagtacaagtccgcagatgaactagccaatatttatattatg
tggtccgagcttgcgttagagtcgtcggatgacgaggctttggagatagtggagcaggtc
ctctacacgatcccttcaaacgcaagtgaaattgaagtggatgatatctcacgaccaatt
caagaacgagttttcaaatctgttcatctttggagcttctacattgaccttctcacatcc
atgagccacgaagacaagctcacaaagaaattgcgatcagcctatgaagcaatgatgagc
cttggagtgattacactaagattggtttttcaatacgctgattttgttctcgcccaaaag
gattatgccggagcttactcaatttacgaattgagcatctcgaagttcaactcacctacg
ccatgcttcaaaatatggatggcatacctcgagaaaattgtctcagtcgagaaggaagag
tcgaaaattctcgatgtttttgacaggtgcctagcatctaatcttccaggtcacctcatc
gctgatgtcttcaagatgtattctcaattcttgcaaacaagaggttctttggcaaagagc
attaaaatactctcacaagcggttgaacgtctctcacaagcatactctcagaagacgatg
tcgacagaaaatgcatataaagtagtcgatgataaatacgagatttatcttattctcttc
gactcgatctcactcaagcttaaggatgtcgatctattacgttctactatcaccaatgca
gtccaagatacgcagctctcgctccctatggtcatcgagctttctcttaagtatgcgaga
ttcgagctggatttgggcgagattggacgggccagagctttactcaaacacgcttcttca
ttggctcacccaagctctcgactgatggagcctgtttggaaggagtggacggagttcgaa
gcaaggaatggcactgagtatacatacaaggatatgcttagtttcaaacgagttgtggct
aacgaattcgaagctcttcaggactacagttcagagattaatccaatgggctttgtcaag
gctgacacgattcaaaaagtcgaagcaatccaagcgactcaagatcctaatgcaattgag
ctcgatatggatatgtag
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