Australozyma saopauloensis: 88175412
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Entry
88175412 CDS
T10743
Symbol
PUMCH_004351
Name
(RefSeq) uncharacterized protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
asau Australozyma saopauloensis
Pathway
asau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
88175412 (PUMCH_004351)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asau03021
]
88175412 (PUMCH_004351)
03019 Messenger RNA biogenesis [BR:
asau03019
]
88175412 (PUMCH_004351)
Transcription machinery [BR:
asau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
88175412 (PUMCH_004351)
Messenger RNA biogenesis [BR:
asau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
88175412 (PUMCH_004351)
U7-dependent histone pre-mRNA processing factors
88175412 (PUMCH_004351)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
88175412
NCBI-ProteinID:
XP_062879359
UniProt:
A0AAX4HEJ7
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Position
5:1038186..1040564
Genome browser
AA seq
792 aa
AA seq
DB search
MTTDNAAAEDSDNFRFFGLGGCNEVGRSCHIIEYKNKVIMLDSGVHPGLGGMNSLPFFDE
YDLSKVDILLISHFHLDHAASLPYVMQQTNFKGRVFMTHATKAIYRWLLSDFVRVTTLFG
GGDGDKQADESPNNNAASANLYTDEDLMMSFEKIETIDYHSTIEVEGIRFTAYHAGHVLG
ACMYFIEIGGVKVLFTGDYSREEDRHLKVAEVPPTRPDILITESTFGTATHEPRLEKETR
MMKNIHSTILKGGRVLMPVFALGRAQELLLILEEYWSLNEDLQNVSIYYASDLARKCMAV
YQTYTSIMNEKIRLSATSGEKTNPFQFKFIKSIRSIDKIQDIGPCVVVASPGMLQSGVSR
TLLERWAPDPKNAVIMTGYAVEGTMAKEILAEPHTIPSIVNPEVAIPRRLSVDEISFAAH
VDFQQNAGFIEEVSPKKIILVHGDSNPMGRLKSALLSRYSSRKGTEEEVKVFNPRNCEDL
LIGIKGAKFAKVVGLLAESEIGLVREFLEKKENESKITEVKDEDAMEEVKTEEAENELQA
KDNGAQVTQDDKFISSGIVLSGVLISKDFDMNLLQLEDLQEYTQLTTSFVKSNIRLKIQA
SVSLILWHLEQMFGHINVVMDEEELWECLIMDMILVSVDKSTPATGLNINVEWINNNAMA
DSLADSIVAILYSVDSSPASVKLTSKTHTHSHIVKKEDSGEVATEDKKGHQLSDISSRIH
RISTLLKAQFGDAITQLDKKGAVVKIGKAEAEIDFTSLQVKCPSRVLKDRVENILKRGCK
LSAPFSTNQKEI
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgacaacgcggcagccgaggattcagacaacttccgatttttcggattggga
ggctgcaatgaggttggtcgctcgtgtcacatcattgaatacaaaaacaaggtgatcatg
ttggattcaggagttcatcccggtcttggaggaatgaactctctcccgttctttgatgaa
tacgatttatccaaggttgacattttgttgatcagtcatttccacttggaccatgctgcg
tccttgccatacgttatgcaacagactaatttcaagggaagagtgtttatgacccacgca
accaaggcaatttatagatggttactctcggattttgtgcgtgtgaccacgctctttggt
ggcggtgatggtgacaaacaggcagatgaatcgcccaacaataacgcagcttctgccaat
ttgtataccgatgaggacttgatgatgtcctttgagaagattgagaccattgactatcac
tccacaatcgaggtcgagggtattagatttacggcatatcacgcaggccatgttttaggt
gcatgtatgtacttcattgaaataggaggtgttaaggtattgttcacgggtgactattct
cgagaagaagaccgtcacttgaaggtggccgaggttcctcccaccaggccggacatattg
attacagagtccactttcggaacagccacccatgagccaagactagaaaaggaaaccaga
atgatgaaaaacatacactctactatcctaaaaggtggacgggtattgatgcctgtgttt
gcgttgggccgcgcccaggaacttctcttaattttggaagaatattggtcgctcaatgag
gaccttcagaatgttagtatatactatgcttcggatcttgctcgtaaatgtatggcagtt
tatcaaacttacaccagcatcatgaacgaaaaaatccgtctcagtgccacttcaggagag
aaaacgaacccatttcaattcaaattcatcaaatcgattagaagcatcgacaaaatccaa
gacatcgggccatgtgtggtggttgcctctccgggaatgcttcaaagtggtgtttcaaga
acacttctagagaggtgggcgcctgatcccaaaaacgcagttatcatgacaggttatgcc
gtggaaggaactatggcgaaagaaattctcgctgagcctcacacaatcccctcaattgtc
aaccctgaagtggcaatccctcgccgtttgtccgttgatgaaatctcttttgcggctcat
gtggatttccagcaaaacgctggattcatagaagaagtttcgcctaaaaagattattctt
gttcatggtgatagtaatcctatgggaagactcaaatctgctttattgagtagatactcc
tctcgaaaaggtacagaggaagaagtcaaggttttcaatccgagaaattgcgaagattta
ctcatcggaattaaaggagccaaatttgcaaaggtggtcggccttctcgcggagtcggag
attggacttgtgagagaattcttagaaaagaaggaaaacgagagtaaaatcactgaggta
aaggatgaagatgcgatggaagaagtaaagaccgaggaagcggagaacgaacttcaagca
aaagacaacggggcccaggtgactcaagacgacaagttcatcagctcaggcattgttctt
tccggtgtcttgatatcaaaagacttcgatatgaacttgctacaacttgaagatcttcaa
gagtatacccagctcacgacgtcatttgtgaaatctaatatcagactcaaaatccaggcc
agtgtctcattgattctctggcatcttgaacaaatgtttggacacattaatgtcgtgatg
gatgaagaagagctatgggagtgccttatcatggacatgatcttagtcagtgttgacaag
agtaccccagctacaggattgaacatcaatgttgagtggatcaataataatgcaatggca
gactcacttgcggatagtattgtcgcaatcttatactcggtcgattcatctccagcatct
gtgaaactcacatcaaaaacacatacacactcgcatatcgtcaagaaagaagattctgga
gaagtcgctaccgaggacaagaagggccatcaattgagcgatattagcagcagaatccac
agaatctcgaccctattgaaggcgcaatttggagacgcaattacacagctcgacaaaaaa
ggagcggtggtcaagataggaaaggccgaggccgaaattgattttacttctttacaagtg
aagtgtccctctcgtgttcttaaagacagagtggaaaacattctcaaaagggggtgcaag
ctttccgcaccattttcaacaaatcagaaggaaatttag
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