Australozyma saopauloensis: 88175455
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Entry
88175455 CDS
T10743
Symbol
PUMCH_004395
Name
(RefSeq) uncharacterized protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
asau Australozyma saopauloensis
Pathway
asau03022
Basal transcription factors
asau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
88175455 (PUMCH_004395)
09124 Replication and repair
03420 Nucleotide excision repair
88175455 (PUMCH_004395)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asau03021
]
88175455 (PUMCH_004395)
03036 Chromosome and associated proteins [BR:
asau03036
]
88175455 (PUMCH_004395)
03400 DNA repair and recombination proteins [BR:
asau03400
]
88175455 (PUMCH_004395)
Enzymes [BR:
asau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
88175455 (PUMCH_004395)
Transcription machinery [BR:
asau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
88175455 (PUMCH_004395)
Chromosome and associated proteins [BR:
asau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
88175455 (PUMCH_004395)
DNA repair and recombination proteins [BR:
asau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
88175455 (PUMCH_004395)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
AAA_11
YtxC
Motif
Other DBs
NCBI-GeneID:
88175455
NCBI-ProteinID:
XP_062879402
UniProt:
A0AAX4HF22
LinkDB
All DBs
Position
5:complement(1138401..1140803)
Genome browser
AA seq
800 aa
AA seq
DB search
MKFEIDGLPVLFPYPKIYPEQYEYMSDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ
MHYPEHRKIVYCSRTMSEIEKALIELKNLMDYRASELGYVEEFRGLGLTSRKNLCLHPTI
SKERKGAVVDEKCRRVTNGQLKQKLEKENVSTEQMNQHADQYGLCSYHEKMYDYDQHDLI
PNGVYSFEGLIQYCKEQGTCPYFTVRRMMPFCNVIIYSYHYLLDPKIAERVSRELSKDSI
IIFDEAHNIDNVCIESLSLYLTDDTLKRATRGANKLADAVEEMKAQDNEKLRDEYQKLVE
GLRQNEIAREEDQFMANPVLPQDLLDEAIPGNIRKAEHFISFLKRFVEYLKTRMKVLHVI
SETPVSFLQHLKELTFIDKKPLRFCSERLSLLVRTLELSDVEDLNALKDIATFATLVSTY
EEGFQLILEPFETEGSTVPNPILHFTCLDASIAMKPVFDRFSSVIITSGTISPLDMYPKM
LNFQTVVQESYTMTLARRSFLPMVVTKGSDQTSISSRFEIRNDPSVVRNYGSLLIEFAKS
TPDGMVVFFPSYLYMESIISMWQTMGVLDEVWKYKLILVETPDAQETSLALETYRKACSN
GRGAVLLSVARGKVSEGIDFDHHFGRTVLMIGIPFQYTESRILKARLEFLRDHYQIKEND
FLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFKNKRGQLPKWISQALYEADTNLSTDM
ALANAKKFLRNLAQPTNPDDQDGVSVWDLERLQEYQRQEKLRNPNIQAEEENVDVDDMES
ANGDAPDDFMDLDDADLEML
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgagatcgacggactcccagtcctctttccgtacccaaaaatctacccagag
caatatgagtacatgtcagatataaaaaagacattggatgtgggcggcaattgtatcttg
gagatgccttcgggtactggtaagactgtctcattgctttcgctaacagtggcgtaccaa
atgcattatcctgagcacagaaaaattgtttactgctctcgtaccatgtcggaaattgaa
aaagcacttatagagttgaaaaatttgatggattaccgggcctccgaactagggtatgtg
gaggaattcagaggcttgggtcttaccagtagaaagaatctttgcttgcatcccaccatt
tcgaaggaaaggaaaggtgccgtagttgatgaaaaatgtcgtcgtgtcaccaatggtcaa
ttgaagcagaaattggagaaggagaatgtctccacagagcaaatgaatcaacacgcagat
cagtatggcctctgctcataccacgagaagatgtacgactatgaccaacacgatcttata
ccgaatggcgtttattcgtttgagggtttgattcagtactgtaaggaacaagggacctgt
ccttatttcactgtcagaagaatgatgccattttgcaatgtgatcatttattcgtatcac
tatttgctagatcctaaaatcgccgagcgcgtttcgcgcgaattgagcaaagacagcatt
attattttcgatgaggcgcacaacatcgataacgtttgcatcgagtctctctctctctac
ctcacagatgatacgctaaaacgagctacaagaggtgctaacaagttagcagacgcagtt
gaagaaatgaaagcacaggataatgaaaaattacgagatgagtatcaaaaattggtagag
ggtctccgacaaaacgagatagctcgtgaagaagatcagttcatggccaatccggttcta
cctcaagatttactagatgaggctattccaggaaatataagaaaagccgagcacttcata
tcgtttttgaaacgatttgtggagtatttgaagacaaggatgaaggttttgcacgtcatc
agtgagacaccggtgagcttcttgcagcatttaaaagagctcacgtttatcgacaagaaa
cccttgaggttctgctctgagcgtttgtccctcctcgtaagaaccttagaactctcagat
gttgaggatttgaacgctttgaaggacattgctaccttcgcgactcttgtgtctacatac
gaggagggtttccagctcattttggagcctttcgaaacggagggctcaacagtccccaat
cccattttgcactttacttgcttagatgcctctattgcgatgaagcctgtatttgatcga
ttctcctccgttatcattacatctggtacgatctcacctttggatatgtacccaaagatg
ttgaatttccaaactgtggtgcaagagtcatacacaatgactttggcgcgcagatcattc
ttgccgatggttgtaactaaaggctccgaccaaacctcaatttcatctcgtttcgagatc
agaaatgatccttctgttgtccggaactacggttctcttttgatagaatttgcgaaaagc
acacctgatggtatggtagttttctttccgtcatacctttacatggagtctatcatttcg
atgtggcaaactatgggtgttcttgacgaagtgtggaaatacaaattgattctcgtcgaa
acaccagatgcacaagaaacatcgcttgctctagaaacatacagaaaagcttgttctaat
ggacgtggagcagtcctattgtctgttgcgcgtggaaaggtctctgaaggtatcgatttc
gaccaccactttggtcgtacagtattgatgattggtatcccattccagtatacagagtca
agaatattgaaggctcgtcttgagtttttacgagaccattatcaaatcaaagagaatgac
tttttgtctttcgatgccatgcggcatgccgcacaatgcttggggcgtgttttgagagga
aaggatgactacggtattatggttcttgcggacagaagattcaaaaacaagagaggacaa
ctacccaaatggatttcgcaagccctatatgaagcagacacaaacctttctacagatatg
gcacttgcgaatgccaaaaagttcctacgcaatttggcccagcctactaacccagacgat
caggacggagtttcagtgtgggaccttgaaagactacaggagtatcagagacaagagaag
ctgcgcaaccccaacattcaagctgaagaggagaatgtcgatgtggatgatatggagagc
gccaacggggacgcacctgatgatttcatggatctcgatgatgcagatctcgagatgttg
tag
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