Australozyma saopauloensis: 88175558
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Entry
88175558 CDS
T10743
Symbol
PUMCH_004498
Name
(RefSeq) uncharacterized protein
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
asau Australozyma saopauloensis
Pathway
asau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
88175558 (PUMCH_004498)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asau03000
]
88175558 (PUMCH_004498)
03019 Messenger RNA biogenesis [BR:
asau03019
]
88175558 (PUMCH_004498)
04121 Ubiquitin system [BR:
asau04121
]
88175558 (PUMCH_004498)
Enzymes [BR:
asau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
88175558 (PUMCH_004498)
Transcription factors [BR:
asau03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
88175558 (PUMCH_004498)
Messenger RNA biogenesis [BR:
asau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
88175558 (PUMCH_004498)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
88175558 (PUMCH_004498)
Ubiquitin system [BR:
asau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
88175558 (PUMCH_004498)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
zf-RING_2
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
88175558
NCBI-ProteinID:
XP_062879503
UniProt:
A0AAX4HEY1
LinkDB
All DBs
Position
5:1366641..1368455
Genome browser
AA seq
604 aa
AA seq
DB search
MSSCDFQFLNLLTRSPLCVEEMDISDKNFKPCPCGYQICQFCYNNIRQNPELNGRCPGCR
RLYDDESVEYRTLTAEEYKMQQVKKEKREREKKQKEKEKKELELASKKHLAGLRVVQKNL
VYVTGLNPPCAQEDLHSVLRSERYFGQYGKILKIVINRKSPMGHVPAALAQSIVVYVTFT
RKEDASKCIEELDGSICDGRMLRAAHGTTKYCLSYLRGHPCPNPNCMFLHEPGEEADSYT
RKDLSTHQGIKMGMSGAGNDSSENLAEYHFHEDDEEDRSNNLTTTALNSTPTVSHSAPVL
PATAHWAKPLATSSSTADSPAVPNSTLANSAAFPTLGEIFKEQKPQKKDTKKSKNKAHKD
GSLPDDVDIDDYTIRRYAEESMERLQALADSKQKLNVCLDGVTDKASSLPFFHFEPTNLT
SYTSTIEDDKSLAVQIIENLLLRPMKNYHLAYSNQAVGQQQNLQQQAQQYQVGQPLPLTQ
TPVAQKMPLDQENEASQRQQQQQQLQQLQQQQQQMLLMLQQQLAQQNALLPPNMTAQQLG
QMAQTPHFVSQLDALKKGERAKTSTPPPPGLFSKASENVVVPQGGQNTPLSSSQLLTQLM
SGKK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctgtgatttccaatttttgaatttactaactcgcagcccattatgtgtggaa
gaaatggatatttccgacaagaacttcaagccgtgtccctgtggctaccagatctgtcag
ttctgctacaacaacattcgtcagaatcccgaattgaacgggcgctgtcccggctgtaga
cggttgtacgacgacgaaagtgtggagtatcgaacgttgaccgcagaagaatacaaaatg
cagcaagtcaagaaagagaagcgcgagcgcgaaaagaaacagaaagagaaggagaagaag
gagctggagcttgccagcaagaagcacttggcgggcttacgcgtcgtgcagaagaatttg
gtgtatgtgactggtttaaatccgccgtgtgcgcaagaagatttacactcggtgttgcgt
tccgagcgctactttggtcagtatgggaagatcctgaagattgtcatcaacagaaagtcc
cccatgggccatgttcctgcggcgctggctcaaagcattgtagtatacgtgaccttcact
cgcaaggaagatgcttccaaatgcattgaggaattggatggctccatttgcgatggccga
atgcttagagcggctcatggtactaccaagtactgcctgtcgtacttacgaggccaccct
tgcccaaatccaaattgcatgttcttgcatgaacctggtgaagaggctgattcttacacg
cgcaaggatttatcgacccaccagggtattaagatgggaatgagtggcgccggcaatgat
agtagcgagaacttggccgagtatcacttccatgaagatgacgaggaggatagatccaac
aatttgaccacaactgcgctgaactctacaccaacagtcagccattcagcgcccgtgctt
ccagctactgctcattgggcaaaaccactggcaacatcgtccagtaccgccgactctcct
gccgttcccaatagcacgttggctaactcagcagcattcccaaccttgggtgagatcttc
aaggagcagaagccacaaaagaaggatacaaagaagtccaaaaacaaggctcacaaagat
ggctcattacctgacgatgttgatatcgacgattacactattagacgctacgctgaggag
tctatggagagattacaagcattggctgattcgaaacagaaactcaatgtttgtttagat
ggagtcactgataaagcttcgtcattgcctttctttcatttcgagcctaccaatcttact
tcgtatacatcaaccattgaggatgacaagtctctcgctgtccaaattatcgagaactta
ttgctcagaccaatgaaaaactatcatttagcatactccaaccaggcagttggccagcag
cagaatttgcagcaacaagctcagcaatatcaagttggtcaacctcttcctctgacgcaa
acccctgtcgcccagaagatgcctttggaccaagaaaacgaggcttctcaaagacaacag
cagcaacagcaactccagcaacttcagcaacaacaacaacaaatgctcttaatgcttcag
cagcagctcgcacaacaaaatgcgctgttgcctcctaatatgacagcccaacaattgggc
caaatggctcaaacaccacacttcgtttcgcagctcgacgctttgaagaagggtgagcgc
gccaaaacctctactccacctcctccaggtttgtttagcaaggcctctgagaatgttgta
gtgccccagggtgggcaaaatacacctctgtctagttctcaattgttgacccaattgatg
agcggaaagaagtag
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