Australozyma saopauloensis: 88175852
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Entry
88175852 CDS
T10743
Symbol
PUMCH_004792
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
asau Australozyma saopauloensis
Pathway
asau03020
RNA polymerase
asau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
88175852 (PUMCH_004792)
09124 Replication and repair
03420 Nucleotide excision repair
88175852 (PUMCH_004792)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asau03021
]
88175852 (PUMCH_004792)
03400 DNA repair and recombination proteins [BR:
asau03400
]
88175852 (PUMCH_004792)
Enzymes [BR:
asau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
88175852 (PUMCH_004792)
Transcription machinery [BR:
asau03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
88175852 (PUMCH_004792)
DNA repair and recombination proteins [BR:
asau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
88175852 (PUMCH_004792)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
88175852
NCBI-ProteinID:
XP_062879783
UniProt:
A0AAX4HHL9
LinkDB
All DBs
Position
6:complement(477566..482653)
Genome browser
AA seq
1695 aa
AA seq
DB search
MDQTTKRPRDGGLNDPRLGSIDRNFKCQTCGEDMAECPGHFGHIELAKPVFHIGFISKIK
KVCECVCMHCGKVLVDDKNPLMMQALRIRDPKKRFNAVWNVCKSKMVCEADTIDEEGQLT
SGRGGCGHTQPTVRRDGLKLWGTWKQNKTFEDNEQPERRLLTPSEILSVFRHISPEDCHR
LGFNEDYARPEWMLITVLPVPPPPVRPSIAFNDTARGEDDLTFKLADILKANINVQRLEM
DGSPQHVISEFEALLQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLM
GKRVDFSARTVISGDPNLDLDQVGVPISIARTLSYPEVVTPYNIHRLTEYVRNGPNEHPG
AKYVIRDTGDRIDLRYNKRAGDIALQYGWKVERHLMDNDPVLFNRQPSLHKMSMMSHRVK
VMPYSTFRMNLSVTSPYNADFDGDEMNLHVPQSPETRAEMSQICAVPLQIVSPQSNKPVM
GIVQDTLCGIRKMTLRDNFIEYQQVMNMLYWIPNWDGVIPPPAVLKPKPLWTGKQLLSMA
IPKGIHLQRFDDGRDMLSPKDKGMLIVDGEIIFGVVDKKTVGATGGGLIHTVFREKGPQP
CAQMFSSIQKVVNYWLLHNGFSIGIGDTIADKETMRNVTLTISEAKQKVQEIILDAQNNR
LEPEPGMTLRESFEHNVSRVLNQARDTAGRSAEINLKDLNNVKQMVTSGSKGSFINISQM
SACVGQQIVEGKRIPFGFADRTLPHFTKDDYSPESKGFVENSYLRGLTPQEFFFHAMAGR
EGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFVYGEDGIDGTAVEKQ
SVDTIPGSDASFENRFRIDVLSPEHSLPESLLESGKEIKGDVALQTVLDEEYSQLLNDRA
YLRDVCFPNGDYNWPLPVNLRRIIQNAQQIFHSGRQKALDLRLDEIVHAVKELCGKLYVL
RGKSKLIKEAQENATLLFQCLLRSRLAARRVIEEFKLSRISFEWVCGEIETQFQKSLVHP
GEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL
EPEIAADIERAKVVQSAIEHTTLKNVTLATEIFYDPDPRSTVIEEDYDTVEAYFAIPDEK
VEETIDNQSPWLLRLELDRAKMLDKQLTMAQVAEKISQNFGEDLFVIWSDDTADKLIIRC
RVIRDPKLEEEGDHEEDQILKRVEAHMLETISLRGIPGITRVFMMQHKVNTPDASGEYTQ
KQEWVLETDGVNLSEVIAVPGVDALRTYSNNFIEILSVLGIEATRTALFKEILNVIAFDG
SYVNYRHMALLVDVMTARGHLMAITRHGINRAETGALMRCSFEETVEILLEAAASAELDD
CRGISENVILGQMPPLGTGAFDVMVDEKMLQQAGPSDAGRAQVGAYADDGGATPYREYEM
EDDKIKFEEGAGFSPIHTANAFDNTGSLTSYGGQASASPTSPFSYGASAGGFGAAASPGY
GATSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPQYSPTSPHYSPTSPLYSPTSPQYSPTSPQYSPTSPSYSPGSP
AYSPSKPKKEDESSD
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaccaccaaacgtccgcgtgacggcggtctcaacgatcctcggttggggtcc
atcgacaggaacttcaagtgtcaaacgtgtggcgaagacatggccgagtgtccgggccac
tttggccacatcgagttggccaagcccgtgttccacatcgggttcatctcgaaaatcaag
aaggtctgtgagtgtgtatgtatgcactgtggtaaggtgcttgtagacgataaaaacccg
ctcatgatgcaggcgctccgcatccgcgacccgaagaagcggttcaacgcggtctggaac
gtatgtaaatctaaaatggtctgtgaggccgacaccatcgacgaagagggccagctaacc
tccggaagaggcggctgtggccacacacagcccaccgtgcgtcgagacggcttgaagttg
tggggaacatggaaacagaacaagacgttcgaggataacgaacagcccgagcgccgtttg
ttgaccccctcggaaatcttgtctgttttccgtcacatcagccccgaggactgccaccgt
ctcggcttcaacgaggactacgcgcgacccgagtggatgttgatcaccgtgttgccggtg
cctcctcctcctgtgagaccctctatcgctttcaacgacacagcgcgtggtgaggacgat
ttgaccttcaagttggccgatattctcaaggccaacattaatgtacagcgtttggaaatg
gacggttcgccgcagcacgttatcagcgagttcgaagcgctcttgcagttccacgtcgcc
acgtatatggataatgacattgcaggccaaccacaagcgttacagaagacaggccgtccg
atcaaatcgatccgtgcccgtttgaagggtaaggagggacgtttgagaggtaacttgatg
ggtaaaagagtcgacttctctgcccgtaccgtcatttcaggtgaccccaaccttgatttg
gaccaggtcggtgtcccaatctccatcgctagaacgctttcatacccggaggtcgtgacc
ccttacaacatccaccggttgaccgaatacgtgcgtaacggccctaatgagcatcccggt
gccaagtatgtgatcagagacaccggtgaccgtatcgatttacgttacaacaaacgtgct
ggagacatcgctttgcagtacggatggaaggtggaaagacacttgatggacaacgatcct
gtcttgttcaatcgtcaaccttctttgcataaaatgtcgatgatgtcgcatcgtgtcaaa
gtcatgccatactctacgttccgtatgaacttgtctgtcacttcgccttacaatgccgat
ttcgatggagatgaaatgaacttgcatgttcctcagtcgccagagaccagagctgagatg
tcgcagatttgcgccgtgcctctccagattgtttctcctcaaagtaacaagccagtcatg
ggtatcgtgcaggacacgttgtgtggtattcgtaagatgacccttcgtgacaattttatt
gagtaccaacaggtgatgaacatgttatactggattccgaactgggacggtgtgattccg
ccgccagcagtgctcaagccaaagccgttgtggacaggaaagcagttgctttcgatggcc
attccaaagggtattcacttgcagagattcgacgatggaagagacatgctcagtccaaag
gacaagggtatgcttattgtggatggtgagatcatcttcggtgtggttgacaagaagaca
gttggtgcaacaggaggtggtttaattcacactgttttccgcgaaaagggtccacaacca
tgtgcccagatgtttagttcgatccaaaaggtggtcaactactggctcttgcataacggt
ttctccatcggtattggtgatacaattgccgataaagaaaccatgagaaacgtcaccctg
acgatttccgaggccaagcaaaaggtccaggagatcatcttggacgcacagaataaccgt
ttggagccagagcctggtatgacgttgcgtgagtccttcgagcataatgtttcccgtgtt
ttgaatcaagctcgtgacactgcaggtcgttctgcagagatcaacttgaaggatttgaac
aatgtcaaacagatggttacttccggttccaagggttcgttcattaacatttcgcagatg
tcggcctgtgttggtcagcaaattgtcgagggtaagcgtattcctttcggatttgccgac
cgtaccttgccgcatttcaccaaggacgactactctcctgagtccaagggtttcgtggaa
aactcgtacttgagaggtttgacgccgcaggaattcttcttccacgccatggctggtcgt
gagggtcttattgataccgccgtcaagactgcagaaaccggatacattcaaagacgtttg
gttaaggcattggaagatatcatggttcattacgatggtaccacgcgtaactctttgggc
gatatcattcaattcgtctatggtgaagacggtatcgatggtactgctgttgagaagcag
tctgtggacactatccctggttccgatgccagtttcgagaacagattcagaatcgacgtt
ttgagtcccgaacactcgcttccggaatcgctcttggagtccggtaaggagatcaagggt
gatgtcgcgttgcagactgttttggatgaggaatactctcaactcttgaacgatcgtgca
tacttgcgtgacgtctgtttccccaacggtgactacaactggccacttcctgtgaacttg
cgtcgtattatccagaacgctcaacaaatcttccacagcggacgtcaaaaggcgctggac
ttgcgtctagacgagattgttcatgcagtcaaggaattgtgcggcaaactctatgttctt
cgtggcaagtcaaagctcatcaaggaggctcaagaaaatgccactttgttgttccagtgt
ttgttgcgttcccgtttggccgcgcgccgtgtcattgaggagttcaagctctcgcgcatc
tcgttcgagtgggtttgcggagaaatcgaaacccaattccagaagtcgttggttcaccct
ggtgagatggtcggtgttattgctgcccagtccattggtgagcctgccacccagatgacg
ttgaacactttccattatgccggtgtgtcttccaagaacgtcaccttgggtgttcctcgt
cttaaggagattttgaacgtcgccaagaatatcaaaactccagcccttactgtctatttg
gagcctgaaatcgctgcggatatcgagagagccaaggttgttcagtctgctattgagcac
acgactttgaagaacgtgaccctggctaccgagattttctacgacccagatccaagaagc
acggtcattgaggaggattacgataccgttgaggcttacttcgctattccggacgagaag
gtcgaggagaccatcgataaccagtctccatggcttctccgtttggagttggacagagcc
aagatgttggacaagcagttgaccatggcccaggtggccgagaagatctcccagaacttc
ggtgaagacttgtttgtcatctggtccgacgataccgctgacaagttgattattagatgt
cgtgtcatccgtgaccccaaattggaggaagagggagaccacgaagaggaccagatcttg
aagagagtcgaggctcacatgttggagaccatctccttgcgtggtattcctggtatcacc
cgtgtcttcatgatgcaacacaaggtcaacaccccagatgcttcgggtgagtacactcag
aagcaggagtgggtgttggaaaccgacggtgtcaacttatccgaggtcattgcagttccc
ggcgtcgacgcgctgcgcacatactccaataactttatcgagattctctcggtattgggt
attgaggctacacgtactgccctcttcaaagaaattttgaatgttattgctttcgacggt
tcgtacgtcaactaccgtcatatggctcttttggttgatgtgatgactgcccgtggtcac
ttgatggccatcacgcgtcacggtatcaacagagcagagaccggtgccttgatgcgttgt
tctttcgaagagactgtcgagatcttgttggaggctgccgcatctgccgagttggacgat
tgtcgtggtatttctgagaacgtcatcttgggtcaaatgcctcctttgggtaccggtgct
ttcgatgtcatggttgatgagaagatgttacaacaggcaggtccaagtgacgctggtcgt
gctcaagtgggtgcttacgcggatgacggaggcgccaccccatacagagaatacgagatg
gaagatgacaagatcaaattcgaggagggcgctggcttttcgcctatccacactgcgaac
gcatttgacaatactggttcattgacctcctatggtggacaagcatctgcttctccaaca
tcaccattctcctatggtgcttctgctggaggatttggtgcagctgcttcgccgggctac
ggtgctacgtcgccaacgtattcgccaacctcgccaagttactctccaacttcgccatcg
tactcgcctacatcgccaagctactcgccaacttctccaagttactcgccaacctcccca
agttactcgccaacctcgccaagttactcgcctacgtcgccatcgtactctccaacttcg
cctagttattcaccaacttcgccaagctactcgcctacgtcgccatcgtactctccaact
tcgccaagttactctccaacttctccaagttactctccaacttccccaagttactcgcct
acgtcgccaagttactcgccaacttcgccatcgtactctccaacttcgcctagctactcg
cctacgtctccatcgtactcgccaacttcgccaagttactcgccaacttcaccacaatac
tcaccaacctccccacattattctcctacgtctcctctgtactcgccaacatctccacag
tacagtccaacgtctccgcagtattctcctacgtcgccttcgtactcgccaggttcccca
gcgtactcgccaagcaagcctaagaaggaggatgaaagcagtgattag
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integrated database retrieval system
