Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0094
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Entry
RATSFB_0094 CDS
T01624
Symbol
lisA
Name
(GenBank) diaminopimelate decarboxylase, lisA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb00300
Lysine biosynthesis
asb00470
D-Amino acid metabolism
asb01100
Metabolic pathways
asb01110
Biosynthesis of secondary metabolites
asb01120
Microbial metabolism in diverse environments
asb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RATSFB_0094 (lisA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RATSFB_0094 (lisA)
Enzymes [BR:
asb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RATSFB_0094 (lisA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
IL7
Motif
Other DBs
NCBI-ProteinID:
BAK80656
UniProt:
G2IFS8
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All DBs
Position
122707..123987
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AA seq
426 aa
AA seq
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MKLHGSLNIIGNDLYIGDIKISDISNKFGTPCYIMDENLIRDNINRFKKSIGEGNRVVYA
GKTFLNTHMVNILKDENVGLDVVSDGELYIAFNCGFDMKNIIFHGNNKSYDEIKMGVEFG
VGRFVCDSEDEILEIYKVSKKLNKKSKVFLRINPGIDAHTHDYIKTACIDSKFGIYKDVD
KILEILNKYNGCENLEIVGFHCHIGSQIFSKDAYIDEVDEIFGLMNEMKVYGFEFREVNL
GGGFGIYYTKEDSPIGIEDIVKIILNRVYYNSNKFNLIIPRVYIEPGRSITGNAGTTIYK
VGIVKEIEGVRNYVSVDGGMTDNIRNALYNANYECIIANKASGSRDYRARISGKCCESGD
VLINDTLIQIPEKGDILAIFSTGAYCHSMSSNYNKITRAPVVFFYNNEVTLRSRRESLSD
LIRLDI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttgcatggttctctaaatataatagggaatgatctttatataggggatataaag
atttctgatatatcaaataagtttggtactccttgctacataatggatgagaacttaata
agagataatataaataggtttaaaaaatctattggagaaggcaatagggttgtttatgct
ggaaaaacttttttaaatactcatatggtaaatatattaaaagatgagaacgtagggctt
gatgttgtttctgatggtgaactctatatagcatttaattgtggatttgatatgaaaaac
attatttttcatgggaataataaaagttatgatgaaattaaaatgggagttgaatttgga
gttggaagatttgtttgtgattcagaagatgaaattttagaaatttacaaagtttcaaaa
aagttaaataagaaaagcaaagtatttttaaggataaatccagggatagatgcacatacg
catgattatataaagacagcttgcatagattcaaaattcggtatatacaaagatgtagat
aaaatattagaaatactaaacaagtataacgggtgtgaaaatttagaaatagttggattt
cactgtcatataggatcacagatattttcaaaagatgcatatatagatgaagtagatgaa
atatttggtttgatgaatgaaatgaaagtatatggatttgaatttagagaggtaaattta
ggtggaggatttggaatttattatacaaaagaagattctccaattggaattgaggatatt
gtgaaaattattttaaatagggtttattataattctaataaatttaatttaattattccg
agagtttacatagaaccaggtagaagtataacaggaaatgcaggaacgactatatataag
gttggaattgtaaaggaaatcgaaggagttagaaattatgtatctgtggatggtggaatg
acagataacataagaaatgcactttataatgcaaattatgaatgtataattgcaaataaa
gcttccgggagtagagattatagagcgagaataagtgggaaatgctgtgaatctggagat
gttttaataaatgatactcttatacaaattcctgagaaaggagatattctagctattttt
tcaacaggggcttattgtcactctatgagtagtaattataataaaataacgagagcgcca
gttgtatttttttataataatgaagtgactctcaggagtaggagagaaagtctttctgat
ttaataagattagatatttaa
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