Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0098
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Entry
RATSFB_0098 CDS
T01624
Symbol
rluF
Name
(GenBank) ribosomal large subunit pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asb03009
]
RATSFB_0098 (rluF)
Enzymes [BR:
asb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
RATSFB_0098 (rluF)
Ribosome biogenesis [BR:
asb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RATSFB_0098 (rluF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAK80660
UniProt:
G2IFT2
LinkDB
All DBs
Position
complement(127009..127740)
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AA seq
243 aa
AA seq
DB search
MDKILNQEKLRINKFLSKYGYCSRRVADELIKQNKVFINNHPATLGSIVNSYDKIYIKEN
SKLKEIESQVDFVYIAFNKPLGITSTTYRKDKSNIIDFINYPKRIFPIGRLDKNSHGLIL
LTNNGDIVNKILRSENNHEKEYLVRVNKEITEDFLSKMRSGIKILNQITKPCKIWKLNEF
TFRIILTQGLNRQIRRMCESLDYKVSYLKRTRILNIKLGDLKIGKYRHLTNDELNKLFEL
IGI
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaattttaaatcaagaaaaactaagaattaataaatttttatctaagtatgga
tattgttcaagaagagtcgctgatgaactcattaaacaaaataaagtttttataaataac
caccctgcaacacttggatcaattgttaactcatatgataagatatacataaaagaaaat
tcgaagctaaaagaaattgaaagccaagttgattttgtatatattgcttttaataagcct
cttggtataacttcaacaacttataggaaagataagtcaaatataatagactttataaat
tatccaaaaagaattttcccaataggaaggcttgataaaaactctcatgggttaatactt
cttacaaacaatggggatattgtaaacaaaattttgagatcagaaaacaatcatgaaaaa
gaatatctagtccgtgtaaataaagaaattaccgaagatttcctatcaaaaatgagatcc
ggcataaaaatattaaaccaaataactaaaccttgtaaaatatggaaattaaatgaattt
acatttaggataatattaactcaagggcttaatagacaaatcagacgtatgtgcgaatca
cttgattataaagtttcatatttaaagagaactagaattttaaatattaaactaggggat
ttaaagattggaaaatacagacatttaacaaatgatgaactaaataaactatttgaattg
ataggaatttaa
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