Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0185
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Entry
RATSFB_0185 CDS
T01624
Symbol
alr
Name
(GenBank) alanine racemase
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asb03000
]
RATSFB_0185 (alr)
Transcription factors [BR:
asb03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RATSFB_0185 (alr)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
Trp_repressor
HTH_31
HTH_7
HTH_24
HTH_Tnp_ISL3
HTH_6
XPB_DRD
TnsD
MtrF
TetR_N
Myb_DNA-binding
Motif
Other DBs
NCBI-ProteinID:
BAK80747
UniProt:
G2IG19
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All DBs
Position
236012..237010
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AA seq
332 aa
AA seq
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MAISIKDVAKEAGVSIATVSRVLNGIEVVNEDTQKRVKEAVAKLGYRPNIIARSLKTQRT
RTVGILIPDISNSLYPEIVRGIEDVSNIYNYNIILCNSDLNLDKEKEYIYILREKMVDGI
LFMSNSLEDEVLDIIQKLDMKTVLIETNVCNKNIPNITIDNIKASSEAVNKLISNGRRRI
LYIGDHKDTLNASAYRYKGYVKALEENGIKIDDELICYCKPFLNNGYEYIQKKIKEGVLF
DGVFCTCDELAIGAINALRENRVDIPEECEIIGFNNILMSAAFSPKLTTIDTSSYDLGSI
GMRTLIKIINNEQINNFNYVVPYNLIERESTR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctatttcaattaaagatgttgcgaaggaagcgggggtatctattgcaactgtttca
agagttttaaatggaattgaagttgttaatgaagatactcaaaaaagagtaaaagaagca
gtagctaaattaggatataggccaaatattatagcgagaagtttgaaaacacaaaggacg
aggacagtcggtattttaatccctgatatatccaattcattatatccagagatagttaga
ggaattgaagatgtttctaatatttacaattataatataatactttgtaattcagattta
aatttggataaagaaaaggagtacatttatattcttcgagagaaaatggttgatggtatt
ctatttatgagtaattctcttgaagatgaggttttggatattatacagaagttagatatg
aaaacagttttaatagaaacaaatgtttgtaataaaaatattcctaatataacaatagat
aatattaaggcatcaagtgaggcggtaaataaacttatatcaaatggtagaagaagaata
ttatatataggggatcataaggatacgttaaacgcatctgcatatagatacaaggggtat
gttaaagcgttagaagaaaatggaattaaaatagatgatgaacttatatgttattgtaag
ccatttttgaataatggatatgaatatatacaaaagaaaattaaggaaggcgttttattt
gatggggtattttgtacttgcgatgaacttgctataggggctattaatgcacttcgtgaa
aatagagttgatattccagaagaatgtgaaattataggattcaataatattttaatgtca
gcagcattttctccgaaactcacaacgattgatacatcgagctatgatttgggttctatt
ggtatgagaactcttataaagataattaataatgaacaaataaataactttaattatgta
gttccatataatttaatagagagggagagtacaaggtaa
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