Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0401
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Entry
RATSFB_0401 CDS
T01624
Name
(GenBank) 1-deoxyxylulose-5-phosphate synthase homolog
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb00730
Thiamine metabolism
asb00900
Terpenoid backbone biosynthesis
asb01100
Metabolic pathways
asb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RATSFB_0401
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RATSFB_0401
Enzymes [BR:
asb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
RATSFB_0401
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
TPP_enzyme_C
PFOR_II
Exotox-A_bind
Motif
Other DBs
NCBI-ProteinID:
BAK80963
UniProt:
G2IGN5
LinkDB
All DBs
Position
complement(472932..474761)
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AA seq
609 aa
AA seq
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MKNFDHLYRIDNPSFLKNLSIDKLYLLSEQIRDFLIESLSHTGGHVSSNLGVIELTIALH
YIFDFEKDKLIFDVGHQCYTHKILTGRAKFFDSLRKFNGLSGFPRRCESNFDIWETGHSS
TSLSAALALAVSRDFKKTSENIISVIGDGALTGGMALEALNNIGYEQKKLLIILNDNQMS
ISKNICALMPKNNNTNIYESSSCISNLKKNESINFSMKQFFQSINLNYSGPIDGHNIKSL
IDALNKIKNISRPSVLHIITKKGKGLHTAENDNIGSWHGIGPFDKSTGLKIKSKNQNHRA
WGSIVSETVERLAKKDKNIVCISPAMTKGSKLEFFKNKFPDRTFDVGIAEQHAATFSGAL
ALSNLKPIFFVYSTFLQRAYDQVIHDIARQNINLLIAVDKCGFATGDGDTHHGIYDISFL
RPIPNISIVMPKDQIEAQHLLYNCLYNYENKGIISYRYPRGYSNLTHVPHFKNIEFGSWT
VEKEGNDLTILTFGPMLKVAHDIYDFFKTKDISIKIVNARFIKPMDEDMLHKIFKSNMPI
VTIEEACKIGGFGSGICEFAIKHKYKNDIEVFGIEDNFFHQGDTDNLRKISGLNTEFMID
KIKALTYIH
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattttgatcatttatatagaatagataatccaagttttttgaagaatctttca
attgataaactttacttactttctgaacaaataagggattttttaattgaatctttaagt
catacaggtggacatgtttcttcaaatcttggagttatagaactaacaatagcactacat
tatatttttgattttgaaaaagataagttaatttttgatgttggtcatcaatgctatact
cataaaatccttacaggtagagcaaaattttttgactctctgagaaaatttaatggactt
tcgggatttccaaggagatgtgaaagcaattttgatatttgggaaacaggtcatagttct
acatctttatctgctgccttagcacttgcagttagtagagattttaaaaaaacatcggaa
aatataatttccgttataggtgatggtgcattaactggtggaatggctcttgaggctcta
aataatattggatacgagcaaaaaaaacttttgattatattaaatgataatcaaatgtct
atttcaaaaaatatttgtgcactaatgcccaaaaataataatacaaacatatatgaatcg
tcttcatgcatatcaaatctcaaaaaaaatgaatcaataaatttttcaatgaaacaattt
tttcaaagtataaatttaaattattcaggacctatagatggccacaatatcaaaagttta
atagatgctctaaataaaattaaaaatatttcaagaccatctgttcttcacataattaca
aaaaaaggtaagggacttcatacagctgaaaatgacaatataggatcgtggcatggaatt
ggtccttttgataaatctactggactcaagattaaatccaaaaatcaaaatcatagagct
tggggatctattgtatcagaaactgttgaacgtcttgcgaaaaaagataaaaatatagtt
tgcatttctcctgcaatgacaaaaggttctaaactagagttctttaaaaataaatttcct
gatagaactttcgatgtaggaatagcagaacagcatgcagcaacattttctggtgcatta
gctttatcaaatcttaaaccaatattttttgtatattcaacattcttacaacgtgcatac
gatcaagttatacacgatatagcaagacaaaacataaatttattaatcgcagtagataaa
tgcggattcgcaacaggtgatggtgacacccatcacggtatatatgacattagttttctt
agaccaataccaaatatatcaatagtcatgccaaaagatcaaatagaggctcaacacctt
ttatataattgtctttataattacgaaaataaaggaatcatatcttatagataccctaga
ggatactccaatttaactcatgttcctcactttaaaaatatcgagtttggctcatggaca
gttgaaaaagaggggaatgatctaactattttaacatttggaccaatgctcaaagttgca
catgatatatatgatttttttaagacaaaagatataagcataaaaattgtaaatgctcgt
tttataaaacctatggatgaagatatgcttcacaaaatatttaaatcaaatatgcctatt
gtaacaatagaagaagcttgcaaaataggaggatttggatcaggtatttgtgaatttgca
atcaaacacaaatacaaaaatgatattgaagtatttggaattgaagataacttctttcat
caaggagatactgataatctaagaaaaatttctggtcttaatacagaatttatgatagac
aaaataaaagcacttacatacatacattaa
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