Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0487
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Entry
RATSFB_0487 CDS
T01624
Symbol
dac
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb00550
Peptidoglycan biosynthesis
asb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RATSFB_0487 (dac)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asb01002
]
RATSFB_0487 (dac)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
asb01011
]
RATSFB_0487 (dac)
Enzymes [BR:
asb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RATSFB_0487 (dac)
Peptidases and inhibitors [BR:
asb01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RATSFB_0487 (dac)
Peptidoglycan biosynthesis and degradation proteins [BR:
asb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RATSFB_0487 (dac)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Peptidase_S13
Beta-lactamase2
PBP5_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BAK81049
UniProt:
G2IGX1
LinkDB
All DBs
Position
complement(578585..579679)
Genome browser
AA seq
364 aa
AA seq
DB search
MKNFSKILVAILCILFSLSSVHIDAYSSSVKSQKPYDLNAHAAIVIDAKTHRILFDKNAR
NILPMASTTKILTSLVAIKYGDLDQKFKISANASSIRGSKVGYKKDEEISLRELIYGLMF
KSGNDAAIAIAEGVAGSIEEFCDLMNEYAKEIGIIDSHFESPHGLDSQNHYSTAYDLALL
TSKTKEIEFFNELSKTKEYTDTGFSRSYQNINKILYMVPQATGTKTGYTGQAGKCLVSSF
NMGDDNEIVVVVLNCTPRWKSSEWLYNFAKDNYEYKKLFSANDLIIDESLENGIKIEGML
KEDVVVPIKKGMEAKSVITLNDNIKNSKDSDDINEFENLGTLKIFENEEQIYICPILNKN
YKSE
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatttttctaaaattttggtagctatactttgtatattgtttagtctctcgagt
gtacatatagatgcttattcttctagcgttaaaagtcaaaagccttacgacttaaatgct
catgccgctattgttattgacgcaaagactcacaggatactttttgataaaaatgctcgt
aatattttaccaatggcaagtacaacaaaaatacttacttcactagtggctattaaatat
ggtgatttggatcaaaaatttaaaatttctgctaatgcctcatcaattagaggatcaaag
gttggatataaaaaagatgaagaaatttctttaagagaacttatttatgggcttatgttt
aaatctggaaatgatgcagcgattgcaatcgctgaaggggttgctggatcgatagaagaa
ttttgtgatctcatgaacgaatatgcaaaagaaattggaattattgattcacattttgaa
tctcctcatggtcttgacagccagaaccattattcaactgcatatgatttagcattgctt
acatcaaagacaaaagagattgagttttttaatgaactttcaaagaccaaagaatataca
gacacgggattttcaagatcatatcaaaatataaacaaaattttatacatggtccctcaa
gcaacgggcacaaagacggggtacacagggcaagctggtaaatgtttagtgtcatcattt
aacatgggtgatgataatgaaattgtcgttgttgttttgaactgtactccaagatggaaa
tcaagcgaatggctttacaattttgcaaaagacaactatgaatacaagaaattattttcc
gcaaatgatttgattattgatgaaagtttagagaatggcattaagattgaaggtatgtta
aaggaagatgtagttgttcctattaaaaaggggatggaagctaaaagtgttattacactc
aatgataacatcaaaaattcaaaagatagtgatgatattaatgagtttgaaaatttagga
acgcttaaaatttttgaaaatgaagaacagatttatatttgccctattctcaacaaaaat
tataaatccgagtaa
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