Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0526
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Entry
RATSFB_0526 CDS
T01624
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asb03019
]
RATSFB_0526 (rnc)
03009 Ribosome biogenesis [BR:
asb03009
]
RATSFB_0526 (rnc)
03036 Chromosome and associated proteins [BR:
asb03036
]
RATSFB_0526 (rnc)
Enzymes [BR:
asb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RATSFB_0526 (rnc)
Messenger RNA biogenesis [BR:
asb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RATSFB_0526 (rnc)
Ribosome biogenesis [BR:
asb03009
]
Eukaryotic type
90S particles
RNase
RATSFB_0526 (rnc)
Prokaryotic type
rRNA processing factors
RATSFB_0526 (rnc)
Chromosome and associated proteins [BR:
asb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RATSFB_0526 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
BAK81088
UniProt:
G2IH10
LinkDB
All DBs
Position
614644..615327
Genome browser
AA seq
227 aa
AA seq
DB search
MHETLIDKFQEIIGVKFKNIDILNLALTHSSYANERGLTEYNERLEFLGDSVLQLCITEY
LYKNCKDNNEGDLTRKRASIVCEASLYKVGEKWKLGEFIKLSKGEKLSGGKTRISTIADA
VEAVIAAVYLDSGYEFAKKFILKFFSYILDTGAIVNYLDHKTRLQEYIQSKTTDKIKYSL
IKEEGPPHNKVFYVQVIIGEKIYGSGTGKSKKEAEQNAAYKTLKLFE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaacacttattgacaaatttcaagagataataggcgtaaagtttaaaaatata
gatatattaaatttggcattaacacatagttcttatgctaatgagcgtggtttgacagaa
tacaatgaaagactggagttccttggagattctgtactccaattatgtataacagagtat
ttgtataaaaattgtaaggataacaatgagggtgatcttactcgtaagagagcatctata
gtttgtgaggcatcgctttataaagttggagagaaatggaaacttggagaattcattaag
ttaagtaagggggaaaaattaagcggtggtaaaacaagaatttctactatagccgatgca
gtagaggcggttattgcagcggtttatttagatagtggatatgagtttgcaaaaaaattt
atactcaaatttttctcatatattttggatacaggagcaatagtaaattatttagaccat
aaaacaagacttcaagaatatattcaatctaaaactactgataagataaagtatagcttg
attaaggaggaaggtcctccacataataaagtattttatgttcaggttattattggtgaa
aaaatatatggatcaggaaccggtaagtctaaaaaagaggctgaacaaaatgctgcatat
aaaactttaaaattatttgagtag
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