Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0564
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Entry
RATSFB_0564 CDS
T01624
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb02024
Quorum sensing
asb03060
Protein export
asb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RATSFB_0564 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RATSFB_0564 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RATSFB_0564 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
asb02044
]
RATSFB_0564 (ffh)
Enzymes [BR:
asb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RATSFB_0564 (ffh)
Secretion system [BR:
asb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RATSFB_0564 (ffh)
Eukaryotic Sec-SRP protein
RATSFB_0564 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
6PF2K
AAA_30
Zeta_toxin
AAA_24
APS_kinase
SRPRB
AAA_33
AAA_25
NPHP3_N
ATP_bind_1
AAA_18
AAA_14
AAA_17
MeaB
Arf
MMR_HSR1
AAA_16
ArsA_ATPase
TsaE
ResIII
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAK81126
UniProt:
G2IH48
LinkDB
All DBs
Position
654718..656082
Genome browser
AA seq
454 aa
AA seq
DB search
MAFDSLASKLQGVFKKLRGKGKLSEQDIKLAMREVKLALLESDVNYKVVKTFISRVSEKS
LGKEVLESLTPAQQVIKIVNDELKSIMGNDQSKLNYNSNSTTVIMLVGLQGAGKTTMAAK
LSLYCRKSGKSPLMIACDVYRPAAVKQLEVLGNQIDIPVFSIPDSKDPLNIVRKGLEKAE
SNMNNVVIIDTAGRLHIDDNLMDELREIKEISNPSEILMVIDSMIGQESVNIAETFNEKL
DVTGFVLTKLDGDTRGGVALSIKEVIGKNIKFIGVGEKISDLEVFHPDRMASRILGMGDV
LSLIEKAQESIDQEEAQKLSERMFANEFNFEDFKSAMHQMKKLGSFSKILQMIPGIGNAM
KELKNINLDDSEKELSKIEAIINSMTAKERKNPKLLIGSASRKSRIAKGSGSTTAQVNKL
IKDFENMSKMMKQFKGMTGKGKFGKKGFFPKLPF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgatagtttagctagtaaactgcagggtgtttttaaaaagcttagaggcaaa
ggtaaattatcagaacaagatataaaacttgctatgcgtgaagtgaaattagctttgctt
gaatcggatgttaactataaagttgttaagacttttataagtagagttagtgaaaaatct
ttgggaaaagaagtgcttgaaagtttgactccggcacaacaagttataaagattgtaaat
gatgaacttaagtctataatgggtaatgatcaaagtaagttaaactacaatagcaatagt
actactgttataatgcttgttggactccagggagctggtaaaactactatggcagctaaa
ctttctctttattgcaggaagtcgggaaagagtccactcatgattgcatgtgacgtatat
agaccagctgcagttaaacaattagaagtgttaggtaatcaaattgacataccagtattt
tcaataccagatagtaaagatcctttgaatatcgttagaaaaggtcttgaaaaggctgaa
tcaaatatgaataatgtggtaattattgatacagcaggacgtttacatattgatgataat
cttatggatgaattgcgagaaatcaaagaaatttcaaatccttctgaaatattgatggta
attgattcgatgattgggcaggagtctgtgaatatagccgaaacatttaatgaaaagtta
gatgttacgggatttgttttaacgaaattagatggggatactcgtgggggagtagcgtta
tctataaaagaagttattggtaagaatattaaattcattggtgttggtgagaagatcagt
gatttggaagtgttccatcccgatagaatggcgtccagaattttgggaatgggtgatgtt
ttgtcacttattgaaaaagctcaggaatcgattgatcaagaggaagctcagaaacttagt
gaaagaatgtttgccaatgagtttaattttgaggatttcaaaagtgctatgcatcaaatg
aagaaattaggttctttttcaaagatacttcaaatgataccaggaattggaaatgcaatg
aaggaattgaaaaatataaatttggatgatagtgaaaaagaattatctaaaattgaagca
attattaattcaatgacagctaaagagagaaaaaatccaaagcttcttataggttcagca
tcaagaaaatctaggatagcaaaaggttctggaagtacaactgctcaagttaataaactt
ataaaagattttgaaaatatgagtaagatgatgaaacaatttaaaggtatgactggaaaa
ggaaaatttggcaaaaaaggattttttcctaaattaccgttttag
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