KEGG   Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0587
Entry
RATSFB_0587       CDS       T01624                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
asb  Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:asb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:asb02048]
    RATSFB_0587 (hsdR)
Enzymes [BR:asb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RATSFB_0587 (hsdR)
Prokaryotic defense system [BR:asb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RATSFB_0587 (hsdR)
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD
Other DBs
NCBI-ProteinID: BAK81149
UniProt: G2IH71
LinkDB
Position
676191..679406
AA seq 1071 aa
MSFYNVVAETNENTVVYEYIPKKNRSEHYQSEAELEKEFINMLCEQGYEYLSIKTENDLK
NNLREKLEELNKYKFSNSEWNSFFKSVIANPNEHIVEKTQKIQEDNIQVLKCDDGSSKNI
TLIDKKNIHNNSVQVINQYVIGKKDGAKYNNRYDVTILVNGFPLVHVELKRRGVAIKEAF
NQINRYQSDSFWAGCGLYEYIQIFVISNGTHTKYYSNTTRFNSVKNSKQSAYRNKNKTSN
SFEFTSFWADAKNKTIADLIHFTETFFAKHTILNILTKYCVFTSENILLVMRPYQITATE
AIINKIKMSNSCKTYGSTAGGGYIWHTTGSGKTLTSFKTAREASNLNFIDKVLFVVDRKD
LDYQTMKEYDRFEKGSANSNVTTKILARQLEDENSKIIITTIQKLSTFVKKNPDHKVYKK
HVVIIFDECHRSQFGEMHTSITKKFSKYYLFGFTGTPVFSVNALKKSEACTTEYIFGDKL
HAYTIVNAINDKNVLGFKVDYVRTMNMQHEDEIDDEMVNDIDREKLMMHPERIKGVTKYI
LNKFDLKTYRGHSKYSYFHDLFTNISEIVSKDHGVVEGIKEKQHIIGFNSIFAVASVNMA
KLYYDEFKRQMGEDPKNKLRIATIFSFGANEEEYDGDLGDENPENASSLDKSSRDFLEEA
IEDYNKMFHTNYDTSSEKFQNYYKDVSLRMKNKELDLLIVVNMFLTGFDATTLNTLWVDK
NLKMHGLIQAFSRTNRIFNSVKSHGNIVCFRNLQKCVDDALVVFGDDDAKRVIILNSFKD
YYYGYTDKDGKRIPGYLEMVEKLKENFPVSDPNIIGEKNQEEFVLLFGAILRMRNLLISF
DEFAGKELITERDFQDYLGKYQDIRDEWNIKRDSGEKMDVGDDVVFEVEFIKEIEINIDY
ILMLVKKYHDTNCKDKEVIITINKAINASPELRSKRQLIESFIKTVDVTDDIFNEWDKYV
ISKYEEDVENIVKSENLNLEATKIFLKNAFRNGEIKTYGTDINSFMPSMSRLDRSSGMSR
AEKKQSIIYKLKELFERYSGILGFKELARELDQTSEEIKEPVLVGTGQSND
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgtctttttataacgttgtagctgaaacaaatgaaaatactgttgtgtatgaatatatt
cctaagaaaaatcgttccgaacactatcaaagcgaggctgaacttgaaaaagaattcatt
aacatgctttgtgaacaaggatatgaatatctatcgattaaaacggaaaacgatttgaaa
aataacttaagagaaaaattggaagagcttaataaatataagtttagtaattctgaatgg
aatagtttctttaagtctgttatagcaaatcctaacgaacatattgtagaaaaaacccaa
aaaattcaagaggacaacatacaagtgttaaaatgtgacgatggttcttctaaaaatata
accctaattgataaaaagaatatacataataattctgttcaagttatcaatcaatatgtg
attgggaaaaaagatggagcaaaatataacaatagatacgatgtgaccattcttgttaac
ggtttccctctcgttcatgtggaattaaaacgtagaggggttgccataaaagaagcattc
aatcaaattaatcgttatcagtccgatagtttttgggcaggatgtggcttgtatgaatat
attcaaatatttgttatatcgaacggcacacatactaaatattattcaaatactacacgt
ttcaactccgtcaaaaattctaaacaatctgcatatagaaacaaaaataaaacgagtaat
agttttgagttcacttctttttgggcagatgcaaaaaataaaactattgcagatttaatt
catttcacagaaacatttttcgcaaaacataccatattaaatatcctcacgaaatattgc
gtatttacttctgaaaatattctcctcgttatgcgtccgtatcaaataaccgcaacagaa
gctatcattaataaaattaaaatgtctaatagttgtaaaacttacggaagtactgcagga
ggtggatatatatggcatacaacaggatcagggaaaacactaacttcattcaaaactgcg
agagaagcctctaatctaaattttattgataaagttttgtttgttgttgaccgtaaagat
cttgactatcaaaccatgaaagaatatgacagatttgaaaaaggttcagcaaatagcaat
gtaacgacaaaaatacttgcaagacaacttgaagatgaaaattctaaaatcataatcaca
accattcaaaaactgtctacattcgttaagaaaaatcctgaccataaagtctataaaaag
cacgttgtaattatttttgatgaatgtcatagaagtcagtttggtgagatgcacacttca
ataacaaagaaattttcaaaatattatttgttcggattcacaggaacgccagtattttca
gttaatgcacttaaaaaatcagaagcatgcacaacagaatatatttttggagataagctt
catgcgtataccattgtaaacgctataaatgataaaaacgttcttggatttaaagttgat
tatgttagaacaatgaatatgcagcatgaagatgaaattgatgatgaaatggttaatgat
atcgaccgtgaaaagttgatgatgcatcctgaaagaataaaaggtgtgacgaaatatata
ttgaataaatttgatttaaaaacttatcgaggacacagtaaatatagttatttccatgat
ttatttacaaatatttctgaaatagtttctaaagatcatggagttgtagaaggaatcaaa
gaaaaacaacacatcattggatttaattctatttttgcagttgcctctgttaacatggca
aaactttattatgatgaattcaaaaggcaaatgggagaagaccctaaaaataaattgcgt
attgcgactatatttagttttggagctaatgaagaagagtatgatggagatttgggagat
gaaaacccagagaatgcttcatctcttgataaatcttctcgtgattttctcgaggaagcc
atagaagattataacaaaatgttccatacgaattatgatacctcaagtgaaaaatttcaa
aactattataaagatgtatctcttcgtatgaagaataaagaattggatcttcttattgtg
gttaatatgtttttgacaggatttgatgctactacattaaatacgctttgggtagataaa
aatttaaaaatgcacggacttattcaggcattttcaaggactaatcgaatttttaattct
gttaagagtcatggaaatattgtgtgttttagaaatcttcaaaaatgtgttgatgatgca
ctcgtggtttttggagatgatgatgcaaaaagagttattattttaaatagttttaaagat
tattactatggatacacagataaagatggtaaacgaataccaggatatttagaaatggtt
gaaaaattgaaggaaaatttccctgtttcggacccaaatattattggagaaaaaaatcaa
gaagaatttgtattactttttggtgcaattcttcgtatgcgtaatttgttaatatcgttt
gatgaatttgctggaaaagagctgataacagagcgtgactttcaggattatcttggaaaa
tatcaagatatccgtgatgaatggaatattaaaagagattctggagaaaaaatggatgtt
ggtgatgacgttgtatttgaagtggaatttattaaagaaatagaaatcaatattgattat
atccttatgcttgtcaaaaagtatcacgatactaattgtaaagacaaagaagtaattatt
acaataaacaaagcaattaacgcaagccctgaacttcgaagcaaaagacaacttattgaa
tcgttcattaaaacagttgatgtaacagatgatatttttaatgaatgggataagtatgtt
atatcaaaatatgaagaagatgtagaaaacattgtgaaatctgaaaatttaaatttagaa
gcaacgaaaatatttttgaaaaatgcattccgcaatggagagattaaaacatacggaaca
gacatcaatagttttatgccatctatgtcaagattggatagaagtagtggaatgagtcgt
gctgaaaagaaacagagcattatatacaaactaaaagaattatttgaaagatattctggg
attttaggattcaaggaattagcaagagaattagatcaaactagtgaagaaattaaggag
ccagttttggtaggtacaggtcaaagtaacgattag

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