Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0616
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Entry
RATSFB_0616 CDS
T01624
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asb03016
]
RATSFB_0616 (truB)
Enzymes [BR:
asb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RATSFB_0616 (truB)
Transfer RNA biogenesis [BR:
asb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RATSFB_0616 (truB)
Prokaryotic type
RATSFB_0616 (truB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAK81178
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All DBs
Position
712335..713216
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AA seq
293 aa
AA seq
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MMCGVINVYKPQNVTSNYIVIKIKKLLNTKKVGHTGTLDLLACGVLPICIGNATKISEYL
INKDKVYSVKIKFGILTDTYDCEGSIVKRDLEFRLDKNKLLSIIENFVGTQEQVPPNYSA
LKINGKRAYELARNGIEFKLKARKISIYFIKDIVIDEKNNECSFIVKCSKGTYIRSLCKD
IADKMGTYGTMTFLERLESGKFKKDTALDFETIDDDKIKKNLIPIDDVLDYPKIEINDPT
AIKLLTNGVSVKNPNYINEIAEGLYLLYVKGSLVGVCERNMLSLSVTKFLNQR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtggagttataaatgtttataaacctcaaaatgttacttcaaattacatcgta
ataaaaatcaagaagttgttaaacacaaaaaaagttggtcatactggaactttagattta
ttagcttgtggtgtgttaccaatctgtattggtaatgctactaaaataagcgaatatttg
attaataaagataaagtttatagtgttaaaataaaatttggaattttaacagatacatat
gattgtgaaggaagtatagtaaaaagggatttggaatttaggctagataaaaataaattg
ttaagtattatagaaaattttgttggaacacaagaacaggttccaccgaattattctgct
ttaaagattaatgggaaaagagcgtatgaacttgcgagaaatggaattgaatttaaactt
aaagctcgaaaaatatcaatctattttataaaggatattgttattgatgaaaagaataat
gaatgttcttttattgttaaatgttctaagggtacttacataagaagtttatgtaaagat
attgcagataaaatgggtacatatgggactatgacttttttagaaagattggagagcgga
aagtttaaaaaggatacggcgttagattttgaaactatagatgatgataaaatcaaaaaa
aatttgatacctattgatgatgttctcgattatcccaaaattgaaataaatgaccccact
gctataaaacttttgacaaatggagtttctgttaaaaatccaaattatataaatgaaatt
gctgaaggattgtatttgctttatgttaaggggagtttggtaggtgtttgtgagcgaaat
atgctttctttaagtgttactaaatttttaaatcaaaggtaa
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