Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0665
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Entry
RATSFB_0665 CDS
T01624
Symbol
pdxS
Name
(GenBank) pyridoxal phosphate synthase yaaD subunit
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb01100
Metabolic pathways
asb01240
Biosynthesis of cofactors
Module
asb_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
RATSFB_0665 (pdxS)
Enzymes [BR:
asb01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
RATSFB_0665 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
Dus
NanE
DHO_dh
His_biosynth
TY-Chap3
Motif
Other DBs
NCBI-ProteinID:
BAK81227
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Position
complement(770089..770964)
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AA seq
291 aa
AA seq
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MNNNRYELNKELAKMLKGGVIMDVTTPEQAKIAEESGACAVMALERIPADIRAAGGVSRM
SDPKMIKGIQEAVSIPVMAKCRIGHFVEAQILEAIEIDYIDESEVLSPADDILHINKRNF
NVPFVCGAKDLGEALRRINEGASMIRTKGEPGTGDIVQAVRHMRKMNCEISKVSSMREDE
LYNVAKELQVPYDLLCYVHENKRLPVVNFAAGGIATPADAALMMQLGAEGVFVGSGIFKS
GNPVKRATSIVQAVTNYNDSKLIAKLSEDLGEAMVGINPDEIELLMSERGK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgaataataatcgttatgaattgaacaaagaattagcaaaaatgctaaagggtggagtt
attatggatgttactacacctgagcaagcaaaaattgctgaagagtcaggagcttgtgct
gttatggctttagaacgtatacctgcagatattcgtgcagctggtggagtatctcgcatg
agtgatccgaaaatgataaaaggaattcaagaagctgtttctattccagttatggcaaaa
tgtcgtattggtcattttgttgaagcacaaatattagaagcaatagagattgattatatt
gatgaaagtgaagttttatcgcctgctgatgatattttacacattaataaaagaaatttt
aatgttccttttgtttgtggtgcaaaagatttaggagaagctttaagaagaattaatgaa
ggtgctagcatgataagaacaaagggtgagccaggtacaggagatatcgtgcaagcagtt
agacacatgagaaaaatgaattgtgaaatatctaaagtttcatcgatgagggaagatgaa
ctttataatgtagctaaagaacttcaggttccttatgatctcttatgttatgttcatgaa
aataaaaggttgcctgttgttaattttgcagctggtggaattgctactcctgcagatgct
gcacttatgatgcaactcggagcagaaggtgtttttgtaggatcaggaattttcaaatcg
ggaaaccctgtaaaaagagcaacatctattgtacaagctgttacaaattataatgatagt
aaacttattgctaaattatctgaagatcttggagaagcaatggttggaattaatccagat
gaaattgaacttcttatgtctgaaagaggtaaatag
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