Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0788
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Entry
RATSFB_0788 CDS
T01624
Symbol
miaB
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asb03016
]
RATSFB_0788 (miaB)
Enzymes [BR:
asb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
RATSFB_0788 (miaB)
Transfer RNA biogenesis [BR:
asb03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
RATSFB_0788 (miaB)
Prokaryotic type
Methylthiotransferases
RATSFB_0788 (miaB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
DUF4252
Motif
Other DBs
NCBI-ProteinID:
BAK81350
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All DBs
Position
complement(901323..902627)
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AA seq
434 aa
AA seq
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MKVAISTLGCRVNIYDTEIMISALKEDNFEVVSYDEFADVYCINTCTVTNTSDKKSRQFI
AKCKKINPNAIIAMVGCYPQVSKDEVSNIKDVNIILGNRFKSQLAYYIRLFLETRNQVIK
VDDNILRNITFEDRSIKTLKDKHRAFIKIQDGCNKFCTYCIIPFARGGVCSKEPRKVFDE
VKSLVSNGYKEVVLTGINSTSYGDDLSENINLVSLIELLDEIDGLERIRVGSVDPEFFTT
EIIVRISKIKKFMPHFHLSLQSGCDSVLKRMRRKYDVALYKRVVEDLRREINDVSITTDI
IVGFPAETDSEFNETYEFLKNIKLQDMHVFKYSKRSGTKAAEMENQVDERIKDERSKKLI
ELNKVNKFGFQKKYLGQTLDVLYCTSISDGSGVYGYTKNYTKVVLNAGKEYLGEIVSTHI
IDLKDDYLIGQHLK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgcaatttctacactaggttgtagagttaatatttatgatacagaaattatg
atttctgcattgaaagaagataattttgaagttgtttcttatgatgaatttgcagatgtg
tattgtattaatacttgtacagttaccaatacaagcgataaaaaatcaagacagtttata
gctaaatgtaaaaaaattaatccaaatgcgattattgccatggttggttgttatccgcag
gtttctaaagatgaagtatccaatataaaagatgtaaatattattttgggcaataggttt
aagagccaattagcgtattacatacgattgtttttggaaactaggaatcaggttataaaa
gttgatgataatattttgagaaatataacattcgaagatagaagtataaaaactttaaag
gataaacatagagcatttataaaaattcaagatggttgtaataagttttgtacatattgt
ataattccgtttgcacgtgggggagtttgtagtaaagagccacgtaaagtttttgatgag
gttaaatcattagtaagtaatggatataaggaagttgtattaacaggtattaattcgact
tcttatggtgatgatttgagcgaaaatattaatttggttagtttaatagaactgcttgat
gagatagatggacttgaaagaattagagttggatcagttgatccagaattttttacgaca
gaaattattgtaagaatcagcaaaattaaaaaatttatgccacattttcatttatcactc
cagagtggatgtgattcagtattaaagagaatgaggcggaagtatgatgttgctctttat
aagagagttgtggaagatcttagaagagaaattaatgatgttagtataacaactgatatt
atagttggatttccagctgaaactgatagtgaatttaatgaaacatatgagtttttgaaa
aatataaaacttcaagatatgcatgtgtttaaatatagcaaaagaagtggaacaaaggca
gctgagatggaaaaccaagttgatgaacggataaaagatgaaagaagcaaaaagcttata
gaacttaataaagtaaacaagtttggttttcaaaagaaatacttaggacaaacattagat
gtattatattgtacatccatttcagatggtagtggagtttatggatatacaaaaaattat
acaaaagttgttttaaatgctggtaaagaatatttaggggaaattgtatcaacacatatc
attgatttaaaagatgattatcttattggacaacatttaaaatag
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