Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0974
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Entry
RATSFB_0974 CDS
T01624
Symbol
sbcD
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asb03400
]
RATSFB_0974 (sbcD)
DNA repair and recombination proteins [BR:
asb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RATSFB_0974 (sbcD)
Archaeal homologous recombinant proteins
RATSFB_0974 (sbcD)
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Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BAK81536
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All DBs
Position
complement(1114386..1115546)
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AA seq
386 aa
AA seq
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MRILHTSDWHIGKKINDFNMIDDQRYVLDQICEIIKQEKIDVVIIAGDLYDKPIVDTHAI
KLLNEVLVKIVNECGAKVILIAGNHDSADRISFGKEFLIDSGIYIEGKFDGNINKISLND
EFGDVNFYPISYFDEVHIKHLFNDVSIKNSNDALIKIMKTLDVDYSKRNIFIAHGYFSNK
DGDKMIESDSERRLSIGGQDVMDASILKEFDYVALGHLHANQKVIVDHIRYSGSIIKYSF
SEMNHKKSVTIVDLGGKGDIKINQIGLKLKHNMREIEGYIDTLISEEFYKDYDLEDYFRI
ILHDSIGISDPAAKIKKVYKNFMEIRFKDNNFNDGNQEEISNLDITVKSPFELFEIFYKS
MTDKELNCDQKDILKDVIEKVNTLDQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagaatactacatacttcagattggcatataggtaaaaagattaatgattttaatatg
atagatgatcaaagatatgttttggatcagatttgtgagattataaagcaagaaaaaatt
gatgttgtgattattgctggagatttatatgataaaccaattgttgatactcatgcaatt
aaacttttaaatgaagtattagttaaaattgtaaatgaatgtggggctaaagtgattttg
atagcaggaaatcatgatagtgcagatagaatatcttttggaaaagaatttttaattgat
tcaggaatttatatagaagggaaatttgacggaaatattaataagatatctctaaatgat
gagtttggagatgttaatttttatccgatatcgtattttgatgaagtacatataaaacat
ttgtttaatgatgtatctataaagaattcaaatgatgcattaattaagataatgaaaact
ctggatgttgattatagtaagagaaatatattcatagctcatggatatttttcaaataaa
gatggggataaaatgattgaaagtgattctgagaggagattgtcaataggtggacaagat
gttatggatgcatcgatacttaaagagtttgattatgtggcacttggacatcttcatgcg
aatcaaaaagttattgtagatcatataagatattcaggatctataattaagtattcattt
tcggagatgaatcataaaaagagtgtgactattgttgatttaggaggaaaaggtgatatt
aaaataaatcaaattggtcttaaacttaaacataatatgagggaaattgaaggttatatt
gatactcttataagtgaagagttttataaagattatgatcttgaagactattttaggata
atacttcatgattctattggcattagcgatcctgcagctaaaattaaaaaagtttataaa
aattttatggagattaggtttaaagataataattttaatgatggtaatcaagaagaaata
agtaatttagatattacagttaaatctccttttgaattatttgaaattttttataaaagc
atgacggataaagaacttaattgtgatcaaaaagatattttaaaggatgttatagaaaag
gtaaatactttagatcaatag
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