Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_1011
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Entry
RATSFB_1011 CDS
T01624
Symbol
rumA1
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asb03009
]
RATSFB_1011 (rumA1)
Enzymes [BR:
asb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RATSFB_1011 (rumA1)
Ribosome biogenesis [BR:
asb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RATSFB_1011 (rumA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_31
Methyltransf_15
Methyltransf_25
TRM5-TYW2_MTfase
N6_N4_Mtase
Cons_hypoth95
Methyltransf_11
PrmA
DOT1
Motif
Other DBs
NCBI-ProteinID:
BAK81573
UniProt:
G2IEJ9
LinkDB
All DBs
Position
complement(1157472..1158812)
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AA seq
446 aa
AA seq
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MKKGEIFELDIIGFDFKGEGYGEIDGERYFVKGAIPYEKLKVRFVKSKGGRKICKRVGIL
NKSHIEISPSCDKFGECGGCTYLNISYEDQIKLKEEALRDLLNEINYDSFLGILKSPKEF
EYRNKMEFSFGDEFRGGPLELGLHKKGNPFGVVPTYNCKLISEDFRKIMRSTVEYFREIG
AEPYKLKTHKGYLRNLVLREGKEEILLSIVTSSQNDMDFREFKDRILSLNLKKSIGGIVH
IVSDSLSDAVNPSKIEIIYGNDFVYEEIFELKFKINTFSFFQTNTEGVKVLYNEVKNRVG
NPNGTILDLYSGVGTIGQVLSKNNKVIGVEIVEDAVKMAKENAKLNNLCCEFICGDVSQV
VKDIKDKISFIVVDPPRAGIGAKGVKNICKFDVENIVYVSCNPQTLRDDLKEFLNNGYKV
NNIQAVDMFPNTYHVETVVLMSRVEK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagggagaaatatttgaattagatataattggatttgatttcaaaggagaaggt
tatggtgagattgacggagaaagatattttgttaaaggagctataccttatgaaaaatta
aaagttagatttgtaaaatcaaaaggtggaagaaaaatttgtaagagggttgggatttta
aataaatcccatatagaaatatctccatcttgtgataaatttggggaatgcggaggatgt
acatatttaaatatttcatatgaagatcaaataaagttaaaagaagaagctttgagggat
cttttaaatgaaattaattatgatagctttttggggatattaaaatctccaaaggagttt
gagtatagaaataaaatggaattttcttttggagatgagtttagaggtggtccacttgag
cttggtcttcataaaaaagggaatccatttggagttgttccaacttataattgtaaatta
ataagtgaagatttcagaaaaataatgagatcaacagttgaatattttagggaaattggg
gcagaaccctataagcttaaaactcataagggttatttaagaaatcttgttttaagagaa
gggaaagaggagatacttttaagtattgttacatcgagtcaaaatgatatggattttagg
gaatttaaagatagaatattaagtcttaatcttaaaaaatctatcggaggtattgtgcat
attgtatctgattcattgagtgatgctgtaaatccaagcaaaatagaaattatatacggg
aatgattttgtgtatgaagaaatatttgaactcaagtttaaaattaatactttttcattt
tttcaaacaaacacagaaggtgttaaggttttatataatgaggtaaaaaatagagtaggt
aatccaaatggaacaattcttgatttatattcaggagttggtactatcggacaagtattg
agtaaaaataataaggttataggggtagaaattgttgaagatgctgtaaaaatggcaaaa
gagaatgcaaaactaaataatttatgttgtgagtttatatgtggagatgtttcacaggtt
gttaaagatataaaagataaaatttcatttattgttgttgatccacctagagcaggaatt
ggagcaaagggtgtgaaaaatatttgtaaatttgatgttgaaaatatagtatacgtttca
tgcaatcctcaaactttacgtgatgacctaaaggaatttttaaataatgggtataaagta
aataatattcaagctgtagacatgtttcctaatacttatcatgtcgagacggtagtattg
atgtcaagggttgagaagtaa
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