Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_1076
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Entry
RATSFB_1076 CDS
T01624
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb00521
Streptomycin biosynthesis
asb00541
Biosynthesis of various nucleotide sugars
asb01100
Metabolic pathways
asb01110
Biosynthesis of secondary metabolites
asb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RATSFB_1076 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RATSFB_1076 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RATSFB_1076 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RATSFB_1076 (rfbB)
00525 Acarbose and validamycin biosynthesis
RATSFB_1076 (rfbB)
Enzymes [BR:
asb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RATSFB_1076 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
BAK81638
UniProt:
G2IER4
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All DBs
Position
complement(1233624..1234616)
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AA seq
330 aa
AA seq
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MKICVVGGAGFIGSNFIHYMINKYRDIYVTCIDALTYAGNLENLELVRQNINFKFYRGNI
LDNNFLDKVFQNEDFDIVVNFAAESHVDKSIYNGQVFLETNIIGTKNLMDMCLKYGVNRY
HQISTDEVYGDLKLEDDKSFEEGDILRPSSPYSVSKASADMLVMSYFKMFKLNVTISRCT
NNYGSYQFPEKLIPVVIVNALKGNKIPVYGDGKNIRDWVYVHDHSMAIDKIIKEGKKGEI
YNISSGYEIDNLSLIKKILRLLNKDYSLITYVDDRLGHDLKYSVDSSKIYNELGFKCITD
FEVGIRNTINWYLSNLNWVDLVLKDKYIEN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttgtgtagtaggtggagcagggtttataggaagcaattttattcactatatg
attaacaaatatagggatatatatgttacttgtatagatgcattgacatatgcggggaat
cttgaaaacttagagcttgttagacaaaatataaattttaaattttatagagggaatatt
ttagataataattttttggataaagtttttcaaaatgaagatttcgatattgtagtaaat
tttgctgcagaatctcatgtagataaatcaatatataatggacaagtatttttagaaact
aacattataggaactaagaatttgatggatatgtgtttgaagtatggtgttaatagatat
catcaaatttcaactgatgaagtatatggtgatttgaaattagaggatgataaaagtttt
gaagaaggagatatattaagaccatcttcaccttattcagtttcaaaggcatcagcggat
atgttagttatgagttattttaagatgtttaaacttaatgtaacaatatctagatgtaca
aataattatggatcatatcaatttccagaaaagttaatacctgttgttattgtaaatgca
ctcaagggtaataagatacctgtatatggcgatgggaaaaatatacgtgattgggtgtat
gttcatgatcattctatggctattgataagattataaaagaaggcaaaaaaggagaaata
tataatatatcctctggatatgaaattgataatttgagtttgataaagaaaatacttaga
ttgttaaataaagattattctcttataacttatgtagatgatagattagggcatgattta
aaatattcagttgatagtagtaaaatatataatgagcttggatttaagtgtataactgat
tttgaagtaggaattagaaatactataaattggtatttgagtaatttgaactgggtggat
ttggtacttaaggataaatatatagaaaattaa
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