Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_1197
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Entry
RATSFB_1197 CDS
T01624
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RATSFB_1197 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asb03021
]
RATSFB_1197 (rpoA)
03400 DNA repair and recombination proteins [BR:
asb03400
]
RATSFB_1197 (rpoA)
Enzymes [BR:
asb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RATSFB_1197 (rpoA)
Transcription machinery [BR:
asb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RATSFB_1197 (rpoA)
DNA repair and recombination proteins [BR:
asb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RATSFB_1197 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
RAD51D_N
SAM_EPH
Cytomega_gL
Motif
Other DBs
NCBI-ProteinID:
BAK81759
UniProt:
G2IF35
LinkDB
All DBs
Position
complement(1378621..1379565)
Genome browser
AA seq
314 aa
AA seq
DB search
MFDIETPKIECIESNEQGTYGKYVIDPLERGYGTTLGNSLRRILLSSLPGVATTSIKINE
VLHEFSTIKGIKEDVTEIILNIKQLALRMEEEGSKVLRLDIKGSKEVTAADIIEEEGIEI
INKDLHIATLEDDGHLNMEITVNRGRGYVPQNKNKVDGNDGYIPIDSIYTPVKRVNFTVE
NTRVGQVTDYDKLTIEVWTNGSIKVDEAISYSAKILIEHFKLFLGLTKEANEVVVMVQKE
EDKKEKVLEMTIEELDFSVRSYNCLKRAGINTVQELAQKSLEDMMKVRNLGKKSLEEVEK
KLKDLGLSLRQSDE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatattgaaacacctaaaattgaatgtatagaatctaatgaacaaggaacatat
ggtaaatatgttattgatcctctagaaagaggttatggaacgactcttggaaattctttg
agaagaatcttactatcatctttgccaggtgtggcaactacttctataaaaattaatgaa
gtattacatgaattttctacgattaaaggtattaaagaagatgtaacagaaattatttta
aatattaagcaattggctttaaggatggaagaagaaggaagtaaagtactacgtttagat
attaaaggaagtaaggaagttactgcagcagatataattgaagaagaaggaattgaaatt
ataaataaagatttacatatagcaacacttgaagatgatggacatttaaatatggagata
actgttaatagaggaagaggttatgtaccacaaaataaaaataaagtagatggtaatgat
ggatatatacctattgattctatttacactccagtaaagagagttaatttcactgttgaa
aatactcgtgtaggtcaagtgacggattatgataaattaactatagaagtatggactaat
ggttctataaaagtagatgaggcaataagttattctgctaaaatattaattgaacatttt
aaattatttttaggtttgactaaagaggcaaatgaagttgtcgtaatggtacagaaagaa
gaagataaaaaagaaaaagtgcttgagatgactattgaagaattagatttctctgttaga
agttataattgtttaaagagagcgggtataaatacagtacaagaacttgcgcaaaagtct
ttagaagatatgatgaaggttagaaatttaggaaagaaatccctagaagaagttgagaag
aagcttaaggatttaggattaagtttaagacaaagtgatgaataa
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