Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_1246
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Entry
RATSFB_1246 CDS
T01624
Symbol
clpC
Name
(GenBank) negative regulator of genetic competence ClpC/mecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
asb03110
]
RATSFB_1246 (clpC)
Chaperones and folding catalysts [BR:
asb03110
]
Heat shock proteins
HSP100
RATSFB_1246 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
AAA_14
Sigma54_activat
TniB
AAA_7
AAA_18
UVR
Zeta_toxin
ABC_tran
nSTAND3
NACHT
T2SSE
NBD_SMAX1
PduV-EutP
AAA_assoc_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BAK81808
LinkDB
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Position
complement(1414595..1417033)
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AA seq
812 aa
AA seq
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MFEKLTERARKVISYSGDDALKLGHGFIGTEHILLGLLREDGPAQKILNSFDVYYDDIFK
EIRTILSPGEIEIKNSEIPLTPRTKKVIESSIDEAKKLGHNHVSPEHILLSIINETDGVA
YKILDKKGVSIVKIWNQTINALNVTIDIQNPHEKEQQLKNLPTPVLDQHGRDLTKLANEG
KLDPVIGRDIETQRVLEILCRRIKNNPCLIGDPGVGKTAIIEGLAQKITEGNIPEILKNK
RVVTLDLSSLIAGTKYRGEFEERLKKIMEEIKKSKNIILFIDEIHTIIGAGGAEGAIDAS
NILKPALARGEIQCIGATTIDEYRKYIEKDTALERRFQPIFVGEPNEDETIDILMGIRDK
YETHHKVKITDEAIRFAVSLSVRFIPDRYLPDKAIDLIDEAAAKIRVRNLTVPIEVKEIE
EEIAKVGKEKQEAITLEDFEKAASLRDKEQKLKERLENSKEKWKVEKYDKEFILTEQELA
SVVASWTKIPVEKLTQTESEKLLKLEEMLKNRVIDQNEAVTSVAKAVKRGRVGIKDPKRP
IGSFIFLGPTGVGKTELCKALSDIVFGSEENIIRFDMSEFMEKHTVSKIIGSPPGYIGFQ
EGGQLTEKVRRSPYSIILFDEIEKAHPDIFNIMLQILEDGHLTDSNGKRVSFKNTIIILT
SNIGADIINKNSSLGFINHKNNEEEIYTKMKNNVLSELKKNFRPEFLNRLDDVIVFKPLD
KKSLTKILDKMLLDFNIRVSSQDISINFSEDVKNYILDNSLSEKYGARPLRRSITKYIED
TLSDQILLGNIKSGDNVEAVLKDNEIFYFKKP
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaaattaactgaaagggctagaaaggttataagctattcgggtgatgatgca
ctaaagttgggtcatggatttataggaacagaacatatattacttggtttactaagagag
gatggacctgcacagaaaattttaaattcttttgatgtatattatgatgatatatttaag
gaaattagaactattttatctccaggagagatagaaataaaaaatagtgagataccatta
acacctaggactaaaaaggttatagagagcagtatagatgaggctaagaaattagggcat
aatcatgtatctcctgaacatatactactatctattataaatgaaactgacggagttgct
tataagatactagataaaaaaggtgtgtccatagtaaaaatatggaaccaaactataaat
gcccttaatgttacaattgatatacaaaatccacacgaaaaagaacaacaacttaaaaat
ttaccgacacctgtattggatcagcatggcagagatcttacaaaattggctaatgaaggg
aaattagatcctgttataggaagagatatagaaacacaaagagttcttgaaatattgtgt
agaagaataaaaaataatccatgtttaataggtgatccgggagttggtaaaacagctatt
atcgaggggttagcacaaaaaataacagaaggtaatataccggagatattgaaaaataaa
cgtgttgtgaccttagatttatcttctttgattgctggaacaaaatacagaggagaattt
gaggaaagattaaagaaaataatggaagagataaaaaaatccaaaaatataattttgttt
atagatgagatacatacaataattggtgctggtggagccgagggagctatagatgcatct
aatatattaaaaccagccttagctagaggagaaatacagtgtataggagccacaactatt
gatgaatatagaaaatatatagaaaaagatacggctttagaacgaagatttcaacccata
tttgttggagaacctaatgaggatgaaacgatagatatattaatgggtataagagataaa
tatgaaactcatcataaagtaaaaattactgatgaagctataaggtttgcggttagtcta
tctgttagatttatcccagatagatatttaccagataaagctatagatttaattgatgag
gctgctgcaaaaataagggttagaaatttaacagtacctattgaagttaaagaaatagaa
gaggaaatagcaaaagttggtaaggaaaagcaagaagcgataactttagaagattttgag
aaggcagcttcgcttagggataaagaacagaaacttaaagaaagattggaaaattcaaaa
gagaagtggaaagttgaaaaatatgacaaggaatttatacttactgagcaggagttagcg
tctgttgtagcaagctggactaagataccagttgaaaaattaacacaaacagaatcggaa
aaattattaaaattagaggaaatgttaaaaaatagagtaatagatcaaaatgaggctgta
acatctgttgctaaggctgttaaacgtggacgtgttggaattaaggatcctaaaagacct
attggttcatttatatttttagggcctactggagttggtaaaactgaattgtgtaaggct
ctatcagatattgtttttggaagtgaagagaatataataagatttgatatgtctgaattt
atggaaaaacatacggtatcaaagattattggatcaccaccagggtatattggattccaa
gaggggggacaattgacagagaaagtcaggagatcaccatattctattatattatttgat
gaaatagagaaggctcatccggatatatttaatataatgctacaaattttagaagatgga
catttaacagattcaaatgggaagagagttagttttaaaaatacaataataatattaacg
tcaaacataggagcagatataattaataaaaattcatcattaggttttataaatcacaag
aataatgaagaagaaatttatactaaaatgaaaaataatgttttgagtgagcttaagaaa
aattttagacctgagtttttaaatagattagatgatgtgatagtatttaaaccgctggat
aaaaaaagtctcacaaaaatattagataagatgctacttgattttaatattagagtgtca
agtcaagatatatcaattaattttagtgaagatgtaaagaattatatacttgataatagt
ttgagtgaaaaatatggggctaggccattaagaaggtctataactaaatatattgaggat
actttgtctgaccaaatattattaggaaacattaaatctggagataatgtggaagctgtg
ttaaaagacaatgaaattttttattttaagaagccttaa
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