Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_1256
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Entry
RATSFB_1256 CDS
T01624
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb00470
D-Amino acid metabolism
asb00550
Peptidoglycan biosynthesis
asb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RATSFB_1256 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RATSFB_1256 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
asb01011
]
RATSFB_1256 (murD)
Enzymes [BR:
asb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RATSFB_1256 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
asb01011
]
Precursor biosynthesis
Amino acid ligase
RATSFB_1256 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox
Pyr_redox_2
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
BAK81818
UniProt:
G2IF94
LinkDB
All DBs
Position
1424939..1426330
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AA seq
463 aa
AA seq
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MRQDFKNFKTNIKNKHVAIVGLGISNIPLINFLSKLGCKITLFDRKEIENFSNSEIKSFN
KLNIKFVFGKNYLNYINNFDYIFKTPSIRSDILEFENARKNGSIITSEIEELLRYCPSKI
YGITGSDGKTTTTSILYNLLKNSGHKTWIGGNIGFPLFSKIEEMHEEDKVVLELSSFQLM
NVTLSPDVSIITNISPNHLDYHKDMDEYINCKKNIFKFQNDNSITILNRDCSITNSFEKE
LNGRCRKFSLDHTCDEDVIKNGAYLKNDELYVLNQRIFHKDDLKIKGVHNMLNFAAAILA
TIPDTSYSTIKNIAKEFSGVKHRNEFVDTINNIHFYNDSIASTPTRTLATLSCFDKKIIL
IAGGYDKNISYAPLLNAHDKIKKLYLIGATKQKIHDIFRKYSSDIEILTFDNFNKLVIHA
YKNAEENDIILLSPASASFDMFKNFEDRGDKFKKIIQTIKASK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagacaggattttaaaaacttcaaaactaacattaaaaataaacatgttgcaatcgtt
ggattaggtataagcaatattccattaataaatttcttatctaaattaggttgcaaaatc
actctatttgatagaaaagaaattgaaaatttttcaaattctgagataaaatcattcaat
aaattgaacattaaatttgtatttggaaaaaactatctaaattacattaataattttgat
tatatatttaaaacaccttctataagatccgatattttagaatttgaaaatgctagaaaa
aatggttctataataacttctgaaatagaagaacttcttaggtattgtccatcaaaaata
tatggaataacgggaagtgatgggaaaaccacaactactagtattttatataatttacta
aaaaattcaggacacaaaacatggattggtggaaatataggattccctttatttagcaag
attgaagaaatgcatgaagaggataaagttgtattagagttatctagtttccaattaatg
aacgtaactctctctcctgatgtatctataataacaaatatatcaccgaatcatttggat
tatcataaagatatggatgaatacatcaattgtaaaaagaacatatttaaattccaaaat
gataatagtattacaatattaaatagagattgttctattaccaattcatttgaaaaagaa
ttaaatggaagatgtagaaaattctctcttgatcatacttgcgatgaagatgttataaaa
aacggtgcctatttgaaaaatgatgaactatatgtattaaaccaaagaatatttcataaa
gatgatctcaaaattaaaggtgttcacaatatgctcaactttgctgctgcaatactcgca
acaataccagatacatcttactcaactattaaaaatattgcaaaagagttcagtggtgta
aaacatagaaatgaatttgtagatacaataaataacatacatttttataatgactcaata
gcatcaactcctacaaggactcttgcgactttatcctgcttcgataaaaaaattatattg
attgcaggtggatacgataaaaatatttcatatgcaccattgttaaatgctcatgataaa
atcaaaaaactatatttaataggagctactaaacaaaaaatacacgatatctttagaaaa
tactcttctgatatagaaatattgacttttgacaattttaataaacttgtgattcatgca
tacaaaaatgctgaggaaaatgatattatacttttatcaccagcttcagcaagttttgat
atgttcaaaaattttgaggatcgtggggataaatttaaaaaaattattcaaacaataaaa
gctagtaaataa
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