Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_1297
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Entry
RATSFB_1297 CDS
T01624
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
RATSFB_1297 (rnmV)
Enzymes [BR:
asb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
RATSFB_1297 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_2
Toprim_4
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
BAK81859
UniProt:
G2IFD5
LinkDB
All DBs
Position
complement(1470198..1470758)
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AA seq
186 aa
AA seq
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MIKIKEVIVVEGICDEIAVKRGVDAEVIYVSGFGISKKTMNLIKNAQERCGVILLMDSDS
AGDRIRKKIADNIKGVKHAYIARDKSTKNGDIGVENAKPEDIISALENAKCELNYKRNEF
TEKDLFDNKLVGNKNSLKRREILGDILGIGISNGKKFLSRLNSFNISREMFRSSLEKLEE
IINDKY
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaattaaggaagttatagtagttgaaggtatatgtgatgaaattgcagttaag
cgtggagttgatgctgaagttatatatgtatctggatttggtatatccaaaaaaactatg
aatttgattaaaaacgcacaagaaagatgtggagttatacttcttatggactcagattct
gcaggtgataggataagaaagaaaattgcagataatataaagggtgttaaacatgcttat
atagcaagagataaaagtactaaaaatggtgatataggagttgaaaatgctaagcctgaa
gatataatttcagctttagaaaatgcaaaatgtgagttaaactataagagaaatgagttc
acagaaaaggatttatttgataacaaacttgtagggaataaaaattcattgaaacgtaga
gagattttgggagatattttaggaattggaatatctaatggaaaaaaatttttatctagg
ttaaatagttttaacatatctagggaaatgtttagatcttcattagaaaagttagaggag
ataataaatgacaaatattag
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