Aliisedimentitalea scapharcae: QEZ52_02135
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Entry
QEZ52_02135 CDS
T10791
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
asca Aliisedimentitalea scapharcae
Pathway
asca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEZ52_02135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asca03019
]
QEZ52_02135
Enzymes [BR:
asca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QEZ52_02135
Messenger RNA biogenesis [BR:
asca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QEZ52_02135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
NAT10_TcmA_helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
WZK90943
UniProt:
A0ABZ2XZ25
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All DBs
Position
complement(468132..469334)
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AA seq
400 aa
AA seq
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MLGLTPRLIANLEGLGITEPTPIQKKAIPHAMNGRDVMGLAQTGTGKTLAFGLPLLSAVQ
RMEGRPAPKSVRALILAPTRELANQIVDNLKSYADGTSTRVSLVVGGVSINPQINRLQKG
VDLLVATPGRLIDLLDRKAVRLDQTQFLILDEADQMLDLGFIHALRRIAPLLPKERQTML
FSATMPKQMSEIAAAYLTNPVRVETAPPGKPADKVTQAVHFIAQAEKTKLLIELLDAHRD
ELALVFSRTKHGAERLMKALEKAGFAAGSVHGNKSQGQRERALRSFKCGETRVLVATDVA
ARGLDIPDVRHVYNFDLPNVPDNYVHRIGRTARAGRDGAAIAFCAPGEMGELKAIQKTMG
KDIPVASGRPWAVEQTKAAPKPQQNNRRRSRRPAGGRKAA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctcaccccccgcctgatcgccaatctcgaaggtctcgggatcaccgaaccc
acacccattcagaagaaagccatcccccacgccatgaacggacgtgacgtgatgggtctg
gcccagaccgggacaggcaaaacactggcctttggtctgccgttgctcagcgcagttcag
cggatggaggggcgtccggccccgaaatccgtgcgggcgctgatcctggcccccacacgc
gaactggccaaccagatcgtggataacctgaaatcttatgccgatggcacatcgacccgg
gtcagcctggttgtgggtggcgtgtcgatcaatccccagatcaaccgcctgcaaaagggc
gtggatctgctggtcgcgacccccggccgcctgattgacctgttggaccgcaaagccgtg
cgcctggaccagacacagtttctgatcctggacgaagccgatcagatgctggatctcgga
ttcatccatgcgctgcgccgaatcgcaccactgctgccaaaagaacgccagaccatgctg
ttttcggccaccatgccgaaacagatgtcggaaatcgctgctgcgtatctgaccaacccg
gtgcgcgtggaaactgcacctccgggcaaacccgccgacaaggtgacccaggccgtgcat
tttatcgcgcaggccgaaaagaccaaactgctgatcgagctgctggatgcgcaccgcgat
gagctggcgctggtgttttcgcgcaccaaacacggtgccgaacgcctgatgaaagcgctg
gaaaaggccggttttgccgccgggtcggtgcatggcaacaaatcccaaggccaacgcgaa
cgcgccctgcgcagttttaaatgtggcgaaacccgggttctggtcgccactgatgtggcg
gcccgcggcctggatattccggatgtacgccacgtctacaactttgaccttcccaatgtg
cctgacaattatgtgcaccgcatcggccggacggcccgtgccgggcgcgacggggccgcg
atcgcattctgcgcacccggtgaaatgggcgaactcaaggcgattcagaaaaccatgggc
aaggatattcccgtggccagcggccgtccctgggctgttgagcaaaccaaagccgcacca
aagccacaacaaaacaaccgtcgtcggtcgcgccggcccgcaggcgggcgcaaggccgcc
tga
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