KEGG   Aliisedimentitalea scapharcae: QEZ52_02135
Entry
QEZ52_02135       CDS       T10791                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
asca  Aliisedimentitalea scapharcae
Pathway
asca03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:asca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QEZ52_02135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asca03019]
    QEZ52_02135
Enzymes [BR:asca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     QEZ52_02135
Messenger RNA biogenesis [BR:asca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     QEZ52_02135
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 NAT10_TcmA_helicase CMS1
Other DBs
NCBI-ProteinID: WZK90943
UniProt: A0ABZ2XZ25
LinkDB
Position
complement(468132..469334)
AA seq 400 aa
MLGLTPRLIANLEGLGITEPTPIQKKAIPHAMNGRDVMGLAQTGTGKTLAFGLPLLSAVQ
RMEGRPAPKSVRALILAPTRELANQIVDNLKSYADGTSTRVSLVVGGVSINPQINRLQKG
VDLLVATPGRLIDLLDRKAVRLDQTQFLILDEADQMLDLGFIHALRRIAPLLPKERQTML
FSATMPKQMSEIAAAYLTNPVRVETAPPGKPADKVTQAVHFIAQAEKTKLLIELLDAHRD
ELALVFSRTKHGAERLMKALEKAGFAAGSVHGNKSQGQRERALRSFKCGETRVLVATDVA
ARGLDIPDVRHVYNFDLPNVPDNYVHRIGRTARAGRDGAAIAFCAPGEMGELKAIQKTMG
KDIPVASGRPWAVEQTKAAPKPQQNNRRRSRRPAGGRKAA
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgctggggctcaccccccgcctgatcgccaatctcgaaggtctcgggatcaccgaaccc
acacccattcagaagaaagccatcccccacgccatgaacggacgtgacgtgatgggtctg
gcccagaccgggacaggcaaaacactggcctttggtctgccgttgctcagcgcagttcag
cggatggaggggcgtccggccccgaaatccgtgcgggcgctgatcctggcccccacacgc
gaactggccaaccagatcgtggataacctgaaatcttatgccgatggcacatcgacccgg
gtcagcctggttgtgggtggcgtgtcgatcaatccccagatcaaccgcctgcaaaagggc
gtggatctgctggtcgcgacccccggccgcctgattgacctgttggaccgcaaagccgtg
cgcctggaccagacacagtttctgatcctggacgaagccgatcagatgctggatctcgga
ttcatccatgcgctgcgccgaatcgcaccactgctgccaaaagaacgccagaccatgctg
ttttcggccaccatgccgaaacagatgtcggaaatcgctgctgcgtatctgaccaacccg
gtgcgcgtggaaactgcacctccgggcaaacccgccgacaaggtgacccaggccgtgcat
tttatcgcgcaggccgaaaagaccaaactgctgatcgagctgctggatgcgcaccgcgat
gagctggcgctggtgttttcgcgcaccaaacacggtgccgaacgcctgatgaaagcgctg
gaaaaggccggttttgccgccgggtcggtgcatggcaacaaatcccaaggccaacgcgaa
cgcgccctgcgcagttttaaatgtggcgaaacccgggttctggtcgccactgatgtggcg
gcccgcggcctggatattccggatgtacgccacgtctacaactttgaccttcccaatgtg
cctgacaattatgtgcaccgcatcggccggacggcccgtgccgggcgcgacggggccgcg
atcgcattctgcgcacccggtgaaatgggcgaactcaaggcgattcagaaaaccatgggc
aaggatattcccgtggccagcggccgtccctgggctgttgagcaaaccaaagccgcacca
aagccacaacaaaacaaccgtcgtcggtcgcgccggcccgcaggcgggcgcaaggccgcc
tga

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