Aliisedimentitalea scapharcae: QEZ52_20480
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Entry
QEZ52_20480 CDS
T10791
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asca Aliisedimentitalea scapharcae
Pathway
asca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEZ52_20480 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asca03019
]
QEZ52_20480 (pnp)
03016 Transfer RNA biogenesis [BR:
asca03016
]
QEZ52_20480 (pnp)
Enzymes [BR:
asca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QEZ52_20480 (pnp)
Messenger RNA biogenesis [BR:
asca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QEZ52_20480 (pnp)
Transfer RNA biogenesis [BR:
asca03016
]
Prokaryotic type
tRNA degradation factors
QEZ52_20480 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WZK88938
UniProt:
A0ABZ2XSW1
LinkDB
All DBs
Position
4406955..4409078
Genome browser
AA seq
707 aa
AA seq
DB search
MFDVTTKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTYARQQKPGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTLSGAPFMGPIAGCRVGFEDGDYVLNPTVDDMQDLRLNPEQR
LDLVVAGTKDAVMMVESEAYELSEAEMLGAVKFAHEQIQPVIDLIIALAEDAAKEPFDFQ
PADYSELFDAVKAAGDTQMRAAFAISDKQERTAAVAAARDAIKEALSEEQLADANLGSAL
KKLEAGILRGDVVKTGKRIDGRSTDEIRSIVCETGMLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGGPGRREIGHGKLAWRALQAVLPA
STDFPYTIRLVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEEDGSYA
ILSDILGDEDHLGDMDFKVAGTENGITSLQMDIKIAGITPEIMEKALAQAKDGRMHILGE
MSKAITGAADFSVHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGIIKI
ASPNGDSIKKAYDMIYSIVAEPEEGAIYTGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKIVDQETGEEISPES
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtaacgacgaaaagcatgcagtggggcgaagaaacgctgacactggaaacg
ggcaaggttgcccgtcaggcagatggttctgtcatcgccaccttgggcgaaacttcggtc
atggccaacgtgacctacgcacgccagcagaaacccggccaggatttcttcccgctgacc
gtgcactatcaggaaaaatactatgccgcgggcaagatccccggcggtttcttcaaacgt
gaggcccgccccaccgaaaaagaaaccctgaccgcgcgtttgatcgaccgtccgatccgc
ccgctgtttgttcccggcttcaaaaacgaagttctggtgatgtgcaccgtgctgtcgcac
gatctggtcaacgacccggatatggttgccatgatcgccgcctcggctgcgctgaccctg
tcgggcgcaccgtttatgggcccgatcgccggttgccgcgttggtttcgaggacggagat
tacgttctgaacccgaccgttgacgacatgcaggacctgcgcctgaaccctgaacagcgt
ctggacctggttgttgccggtaccaaagacgccgtgatgatggtggaatccgaagcttac
gaactgtccgaggcagaaatgctgggtgcggtgaaatttgcccacgagcagatccagccg
gtgatcgacctgatcattgccctggccgaagacgccgccaaagagccgttcgacttccag
cctgccgattattcggaactgttcgacgctgtcaaagccgctggtgacacccagatgcgc
gccgctttcgcgatcagcgacaaacaggagcgcaccgccgctgttgccgccgcccgtgac
gcgatcaaagaagcgctgagcgaagagcaactggcagacgccaacctcggctcggccctg
aaaaagctcgaagcaggcatcctgcgcggtgacgttgtcaaaaccggcaaacgcatcgac
ggtcgttcgaccgacgaaatccgttcgatcgtctgtgaaaccggcatgctgccgcggacc
cacgggtcggctctgttcacccgtggtgaaacacagggtctggttgtgaccactctgggc
accggcgacgacgaacagttcatcgacgcgctgcacggcaacttcaaatccaacttcctg
ctgcactataacttcccgccctattcggttggcgaagttggtcgtgtgggtggccccggc
cgtcgtgaaatcggtcacggcaaactggcatggcgcgctctgcaggcggttctgcctgcg
tccaccgatttcccctacaccatccgtctggtgtcggagatcaccgaatccaacggctct
tcgtcgatggcatcggtttgcggtggctccctgtcgatgatggacgcgggtgttccgctg
aaatcggctgtggctggtgttgccatgggtctgatcctcgaagaggacggctcctacgcg
atcctgtccgacattctgggtgacgaagaccacctgggcgacatggacttcaaagtggct
ggtaccgaaaacggcatcacctcgctgcagatggacatcaagatcgcaggcatcacgccc
gagatcatggaaaaagccctggcacaggccaaagacggccggatgcacatcctgggtgaa
atgtccaaggcgatcaccggtgcggctgacttctcggtccacgccccgcgcatcgaaacc
atgcaggttcccaccgacaagatccgtgaagtcatcgggtccggcggcaaggtcatccgc
gaaatcgttgaagtgtcgggcgccaaggtcgacatcaacgacgacggcatcatcaagatc
gcatcgcccaacggcgactcgatcaagaaagcctacgacatgatctattcgatcgtggcc
gagcccgaagaaggcgcgatctacaccggcaaagtcgtcaaaatcgtcgacttcggtgcc
ttcgtgaacttctttggcaaacgcgacggcctggtgcatgtgtcccagatcgaaaaccgc
cgcctgaaccatccttcggacgttctgaaggaaggccaggaagtcaaagtcaaactgctc
ggctttgatgatcgcggcaaagtgcgcctgtcgatgaaaatcgtggaccaggaaaccggc
gaagaaatcagccccgaatcctga
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