Hoyosella subflava: AS9A_1832
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Entry
AS9A_1832 CDS
T01514
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
asd
Hoyosella subflava
Pathway
asd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AS9A_1832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asd03400
]
AS9A_1832
Enzymes [BR:
asd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AS9A_1832
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AS9A_1832
DNA repair and recombination proteins [BR:
asd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AS9A_1832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
DUF7577
DNA_ligase_ZBD
Ribosomal_S13
DZR
Motif
Other DBs
NCBI-ProteinID:
AEF40281
UniProt:
F6EMC1
LinkDB
All DBs
Position
1899125..1899994
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AA seq
289 aa
AA seq
DB search
MPELPEVEAIAHFLRKHAVGMGIARIDVSQISVLKTFDPPIDALRERTVSGVQRCGKYLA
LVCAQPGDSEIFLVFHLARAGWLRWSDALSPAAPKPGRGPIALRIHLSGGGGLDLTEAGT
KKNLAVWVTRDLAALHQIERLGTDALEITESELSGKLQGSSARLKTFLTDQTVLSGIGNA
YSDEILHLAKLSPFAQANSLSEEAAQNLHTAIYAVLSDAVTRCVGESVARLKGEKRSGLR
VHARTGLPCPECGAPVREVAYADRSFQYCAQCQTGGKVLADRRMSRLLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaacttcctgaagtagaagctatcgcgcactttctgcgcaagcacgccgtgggg
atggggatcgcgcgtattgatgtctctcagattagcgtgctgaaaacgttcgacccgcca
atcgatgcgctccgtgaacgtacggtctcgggcgtacagcgctgcggaaagtacctggcg
ctagtgtgcgctcaacctggagacagtgagatcttcctggtcttccaccttgcgcgcgct
gggtggctgcgctggtccgatgcgttgtcccctgcagcgccgaaacctggccgcggaccg
attgcgttgcgaattcacctgagcggcggaggcgggctcgacctcaccgaggccgggacc
aagaagaatctggccgtgtgggtgacccgtgatctcgctgcacttcatcaaatcgagaga
ttgggaactgacgcgctcgagatcacggaatcggaactcagcggaaaactccagggttcg
tcagcacggttgaagacgtttctcaccgaccagacagttctctcgggcatcggaaatgcc
tactccgacgagattctgcacctcgccaagctatcgccattcgcccaggcgaattcgttg
tccgaggaagccgcccagaatctgcacacggccatctacgcggtcctctccgatgcagtg
acaaggtgcgtgggcgagagtgttgccaggctgaagggggagaagcggtcaggcttgcga
gtgcatgcccggacagggttgccatgcccagagtgtggtgctcccgttagggaggttgcc
tatgccgaccgttcatttcagtactgcgcgcaatgccagaccggcgggaaggttctggct
gaccgcaggatgtctcgactactgaaatag
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