Hoyosella subflava: AS9A_2653
Help
Entry
AS9A_2653 CDS
T01514
Symbol
alkA
Name
(GenBank) Putative 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
asd
Hoyosella subflava
Pathway
asd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AS9A_2653 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asd03000
]
AS9A_2653 (alkA)
03400 DNA repair and recombination proteins [BR:
asd03400
]
AS9A_2653 (alkA)
Enzymes [BR:
asd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AS9A_2653 (alkA)
Transcription factors [BR:
asd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AS9A_2653 (alkA)
DNA repair and recombination proteins [BR:
asd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AS9A_2653 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AEF41100
UniProt:
F6EHC1
LinkDB
All DBs
Position
2699438..2700919
Genome browser
AA seq
493 aa
AA seq
DB search
MPPVSALVQNRELCYRAVTARDQRFDGQFVTAVRTTGIYCRPSCPAQTPHPENVDFYPTP
AGAQQAGFRACRRCSPDAAPGTPGWNVTSELATRALTLIAEGVIERSGVAGLAAKLGYST
RHVNRILVAELGAGPLALARSFRARTARALLQSTAMPIADTAFASGFSSVRQFNDTIARI
YGLTPSQLRREDTADQSGGGALTLQLPFRGPLNASWVQWFLAGHAVPGMETARSDSFTRG
LRLPRGLASVRLRLADDHVKATLALTDLRDLMPAVARIRHLLDLDADPVAVDRALSLHPS
LRPLVSGSPGIRVPGCADPTETVIRALLGQQVSRRAAITLTSRLVAQLGEEAPPIDRSET
PPKVFPSAAAIAEHGRTVLSGPIRRIRSIIAAAQALDAGTLRVHPGADPAELHDTLLTCD
GFGPWTASYVAMRVTRHPDIFLHGDHVVAKSLSDLSLTAADAQHWAPWRSYATMHLWWHY
VRDTATRKETAAS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccagtgtccgcactggtacagaatcgcgagctgtgctatcgggctgtcactgca
cgtgaccagcgattcgatggtcagtttgtgaccgcagtgcgcaccacgggtatttactgt
cggccctcgtgcccagcgcagacaccgcaccccgagaacgttgacttctaccccaccccg
gccggcgcccagcaggccggtttccgcgcgtgccgacgttgcagccctgatgccgcgcca
ggcactccaggctggaacgtcacctccgaactggcgacacgcgctctgacgctgatcgct
gagggggtcatcgaacgcagtggcgtcgcgggcctcgcggctaaactcggctactccacc
cgccacgttaaccggatcctcgtcgcggagctcggtgcgggcccactcgcgttggcgcga
tcgtttcgcgcgcgcacagcgcgtgcgttgctgcagtcgaccgctatgccgatcgcggac
accgcgttcgcttccggattctccagcgtgcggcagttcaacgacaccatcgcacgcatc
tacggcctcacgccatcgcaactgcgccgggaagatactgcggaccagtccggtggtggc
gcgctgactttgcagctgcccttccgtggccctctcaacgcctcctgggtgcagtggttc
ctggcgggtcacgcagtgcccggcatggaaaccgcgcgcagtgactcattcactcgcgga
ctgcggctgcctcgaggtctcgcctccgtgcgcctgcgcctcgccgatgaccacgtgaag
gcgaccctcgcactgaccgatcttcgcgacctcatgcccgctgtagcgcgtattcgccac
ctgcttgacctcgatgccgatcccgttgcagttgatcgcgcactcagcctgcacccatcc
ttgcgtcccctggtttcgggaagtcctggcatccgtgtccctgggtgcgcagaccccacc
gagacggtgatccgggcgctgctcggacaacaggtttccaggcgcgccgctatcaccctt
acgtccagactggtggcgcagctcggcgaagaggcgcctcccatcgaccgaagcgagacg
ccgcccaaagtgtttccgtcagcggcagcgatcgcggagcacggccggacggtgctttcc
ggcccgattcgccgtattcgttcgatcattgccgccgcccaggcactcgacgcggggacg
ctgcgtgtccaccctggcgctgacccggctgaactccacgacacgctgctcacgtgtgat
ggttttgggccgtggacggcatcctacgtcgcgatgcgcgtaacccggcacccggacatt
ttcctgcatggagaccatgttgttgcgaaatcgctgagcgacctttcgctaactgccgcc
gatgcgcaacattgggcaccgtggcgttcctacgcaacgatgcacttgtggtggcattat
gtgcgcgataccgcgacccgaaaggagacggcagcgtcatga
DBGET
integrated database retrieval system
