Hoyosella subflava: AS9A_3314
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Entry
AS9A_3314 CDS
T01514
Symbol
deaD
Name
(GenBank) Putative ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
asd
Hoyosella subflava
Pathway
asd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AS9A_3314 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asd03019
]
AS9A_3314 (deaD)
03009 Ribosome biogenesis [BR:
asd03009
]
AS9A_3314 (deaD)
Enzymes [BR:
asd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AS9A_3314 (deaD)
Messenger RNA biogenesis [BR:
asd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AS9A_3314 (deaD)
Ribosome biogenesis [BR:
asd03009
]
Prokaryotic type
rRNA helicases
AS9A_3314 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
FAD_binding_9
Clathrin-link
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AEF41756
UniProt:
F6EP96
LinkDB
All DBs
Position
complement(3388837..3390600)
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AA seq
587 aa
AA seq
DB search
MSNSEPDQASFAGLGIDDRVLRALGDVGYETPSPIQLATIPHLVAGRDVVGLAQTGTGKT
AAFATPILTRIDEEHARPQALVLTPTRELAIQVAEAFGRYSVHLPGIRVLPIYGGQSYGV
QLSGLRRGAHIIVGTPGRVIDHLTRGTLDISQLRFLVLDEADEMLKMGFQEDVERILAMA
PEGRQSALFSATMPRAIREISRTYLRDPAEVTIKSTTKTSDTINQRWVLVSHARKLDALT
RFLEVEPFDAMLIFVRTKQATDELAEKLRARGFASTSLNGDIPQPVRERIVGELRAGKID
ILVATDVVARGLDVERISHVVNFDIPTDNDSYVHRIGRTGRAGRSGEALLFVTPRERRLL
RSIERSTGQPLEEIQVPTVEDVNAQRVSRFEDAITENLSNPDLALFRRLIEGYEREHDVC
MADIAAALAVQSTDGDTFFLKPDPPERPRSERPGREGREKSGSKFSDKPAGGRRRVAGDR
RMATYRINVGKKNKVAPGAIVGALANEGGLNRDDFGYIDIRSDYSLVELPAELPGEVFDA
LRATRIGGVRIGLRKDDGAPRGNDRSADRNRPAKSDERPRKSFRDRS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagtgaacccgaccaggcttcgttcgccggtcttggaatcgacgatcgagtg
ctacgggcactgggagacgtcggctatgaaaccccgtcgcccattcagttggcgaccatc
ccgcacctcgtcgcgggtcgtgacgtcgttggtcttgcccaaacgggaaccggaaagact
gcggcgttcgcaaccccgatcctgacgagaattgacgaagagcacgcacggcctcaggca
ctggtcctcacgcctactcgtgagctcgccattcaggtcgcggaagcgttcggccggtac
tcggtgcacctgcccggcatccgtgtgctccctatctatggtggtcagagctacggtgtc
cagttgtccggcctgcgccgcggcgcccacatcattgttggcactcctggccgggtcatc
gaccatctgacacgcggcaccctcgacatctcgcagctgagattcttggtcttggatgaa
gccgacgaaatgttgaagatgggtttccaggaggatgtcgagcgcatcctcgcgatggcc
cccgaggggcgtcagtccgcgctgttctcggccacgatgccgcgcgcgatccgcgagatc
tcccgcacgtacttgcgtgatcccgcagaagtcacgatcaagtccacaacgaagacctca
gacacgatcaatcagcgctgggttctggtttcgcacgcacgtaaactcgacgccctcacc
aggttcctcgaggtcgagccgttcgatgcgatgctcatcttcgtgcggacaaagcaggct
actgacgagcttgcggagaaactgcgagcacgcgggttcgcgtcgacgtccttgaacggt
gacattccgcagcctgtgcgagaacgaattgtcggggaactccgcgcggggaagatcgac
attctggtggccacagatgtggtggcgcgcggacttgatgtcgaacgcatctcccacgtt
gtcaactttgatattcctaccgacaacgactcctacgttcaccgcatcggtcgaaccgga
cgtgccggccgcagcggagaagcgttgctgttcgtcacaccccgtgagcggcgattgttg
cgttccatcgagcgctcaaccggccagccattggaagagattcaggttcccaccgtcgag
gacgtgaacgcgcagcgcgtgtcgcgattcgaggacgcgattacggaaaacctatcgaat
ccggacctcgcgctcttccgtcgcctgatcgaaggatacgagcgtgagcatgacgtttgc
atggcggatatcgccgccgcgctcgcagtgcagtcaacagacggcgataccttcttcctg
aagccagaccccccggagcgtccgcgcagcgagcgtcctgggcgggaaggccgcgaaaaa
tccggtagcaagttctcagataagccggccggtggtcgccgcagggtagctggcgatcgc
cgaatggcgacgtaccgaatcaacgtcgggaagaagaacaaggtcgctccgggtgcgatc
gttggtgctctcgcgaatgaaggcggactgaatcgcgacgacttcggatacatcgatatc
cggtcggactacagcctcgtggagcttcccgcagagttgcctggcgaggtcttcgacgcg
ttgcgtgcgacccggatcggcggggtgcgtatcggcctgcgcaaggacgacggtgctccc
cgcgggaacgaccgcagcgctgacaggaatcgtcccgcgaaatctgatgaacggccgcga
aagtcatttcgggaccgaagctag
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