Actinoplanes sp. SE50/110: ACPL_2259
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Entry
ACPL_2259 CDS
T02044
Symbol
sig1
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03090
RNA polymerase sigma-B factor
Organism
ase
Actinoplanes sp. SE50/110
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ase03021
]
ACPL_2259 (sig1)
Transcription machinery [BR:
ase03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPL_2259 (sig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
STAS_2
STAS
Sigma70_r4_2
KORA
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AEV83156
UniProt:
G8SK58
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All DBs
Position
2426985..2428142
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AA seq
385 aa
AA seq
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MPYQREVLVAPQREDYDEIALRYADACATADSARAERLREDMIRAVLPMAERLARRYRGG
SEPYADLVQVARVGLVKAVNRYDPERGSFTAYAVNTIRGELKRHFRDHAWAVHVPRRMQE
ALLELTCLENELTRELHRRPTDAELAGQVGVPADEISRIRSAGSAFRPVSLSTPIGEGDL
LLGDTLGNPDGRLEDAADRLTVTELLDYLPSRERRIVHATFYERRTQTEIAAGLGISQMH
VSRLLARALSWLRAGLLTDQVPRWPVTGDAPEELFALHTRLPARGELQISVVGEVDRDNA
DRLRVALLELIRHQPACARVTLELGEVPLLDAAALRVLRSVYEAAQARHVRVTATGASAF
LRRLAVIAGLGSMLADNTAEDLSRR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccgtaccaacgagaggttcttgttgcccctcagcgggaggactacgacgagatcgcc
ctgcgctacgccgacgcgtgtgccacggccgacagcgctcgggcggaacggttgcgcgag
gacatgatccgcgcggtgctgccgatggcggaacggctggcccgccgctaccggggcggt
tccgagccgtacgcggatctggttcaggtggctcgggtcggcctggtcaaggcggtgaac
cggtacgaccccgagcgtggctcgttcaccgcctacgccgtcaacacgatccgcggtgag
ctcaagcgtcacttccgcgaccacgcctgggcggtgcatgtgccccgccgcatgcaggag
gcgctgctcgagctgacgtgcctggagaacgagctgacccgggaattgcaccggcgtccc
accgatgccgaactggccgggcaggtgggcgtaccggccgatgagatctcgcggatccgg
agcgccggcagcgcgttccggccggtgtcgctgagcaccccgatcggcgaaggggatctg
ctgctgggcgacaccctgggcaatcccgacggcaggctcgaggacgccgcggaccggctc
actgtcaccgaactgctcgactatctgcccagccgggaacgccggatcgtgcacgccact
ttctacgagcgccggacgcagaccgagatcgccgcggggctcggaatctcccagatgcat
gtgtcgcggctgctggcccgcgcgctgtcgtggctgcgtgcgggtctgctgaccgatcag
gtgccgcgctggccggtgaccggcgacgcgccggaagaactgttcgccctgcacacccgg
ctgccggcccgcggtgagctgcagatcagtgtcgtcggcgaggtcgaccgggacaacgcc
gaccggctgcgggtggcgctgctggagttgatccgccaccagccggcctgtgcccgggtc
acgctggaactcggggaggtgccgctgctggacgcggccgccctgcgagtgctgcgatcg
gtgtacgaggcggcccaggcacgccacgtcagggtgaccgctacgggtgcgagtgccttc
ctgcgcaggctggctgtcatcgccgggctcggctcgatgctggccgacaacacggccgag
gatttgagccggcgatga
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