Actinoplanes sp. SE50/110: ACPL_2487
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Entry
ACPL_2487 CDS
T02044
Name
(GenBank) Collagen alpha-4(VI) chain
Organism
ase
Actinoplanes sp. SE50/110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsX
Motif
Other DBs
NCBI-ProteinID:
AEV83382
UniProt:
G8S0M7
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Position
2684736..2688248
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AA seq
1170 aa
AA seq
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MPTILWGAVRSRAAQACTLLLLTGLPAAVAAAAPRFVLTGTERAATAAAAGVPAAQRTIT
VHREDDTQGDPAATLAGFGAAVDRTLPMPGAATVLGLSRQMSVTDASGVPTPINVDYRAG
FCRRVRLTAGTCPAAAGDAALTTAVATRLGVRPGDLVRIQSTSAAPFLPLRVTGIYEIIA
PETGYWADELYRTGSGTDPIYTAAATFTGDQLGRAVLTWSAEAPPALLRGAGGYDLGALV
ARAGELGDVEDPTGPLRADLADAGARLLRAVLLAAVPVLLLGWYAIALAGRYTARDRRRD
AAWAKLRGGRRRRVLLLLSGQHLPPVLAGGLLGATVGIGVARLLDGAAPPVTAAGSPGAS
GVDAGSWGSPDVVAGSSGSPGVVAWSLGAAGLVVGGALATLVIADLLLLRTPVGTLQRDI
PAARGGRAALLADALLVAVAVAAAYQARSGSPDAGVGAVAPLAVAAAVAVLLARLLIRAA
DAGGAAALRAGRLRAGLAAVRMSRLAGLDRVFAILAVAVAILVTAAGAAGADRRAHRERA
EAELGAARVLTVRVPNWTVLWHAVRAADPAGRYAMAAAVDRTGSPPTVAVDFGRLGVVGA
WRPEYGPRPAPPESPVPSVLPNSPDTPASPGPATSTGTSTSPGAATSSGTSTSPGAAASR
GTSTPPGTLGSKGTSVAPVSPTSAGTAAPRGTHASAGAKASADTPASTATGAPAGSVSSL
GTKAPLNTDASPGTPAASAAFVPTGGSAPQGPQVSSAPSRSGVPVVSVGAGPGVTDGAPG
TAVISGRSLVLKVRNGRTAAATVDAVLLNETSGARVVVSFGPVPPGEHAVTRPLDGCDGG
CRLLRWEIPSLPGADGKPTPDPVVLHSLARLGPDAELIGPARMADATRWRTVAAGVGLQL
SGGPDGLTVTAAPNGGTADSDRVFAVDSLLPLPVLLAGPTPVPWRFAEPEITVLGAGPVP
ARVTGTAAALPVTGAAGILLDFDTVRRTAGEFSPAGETQVWLTANAPPDVVDRLRAAGVT
VLGDESIAGRAARRPGRGTAPAGPFALLCAVSAVFTAAGATAVAAAVDRVPQRAATAALR
VQGLPARAAAATRYLGPSALVAAGTLGGVAAALVARWITGEPESFFADGWRLLPPPEVLG
GAPLLLAAFAAWLFLTLLAALAARTEGDHR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgatcctgtggggcgcggtacgttcccgggccgcgcaagcctgcacactcctg
ctgctcaccgggctgccggcggcggtcgccgcggccgcgccccggttcgtgctgaccggg
accgaacgggccgccaccgccgccgcggccggcgtccccgccgcccagcgcaccatcacc
gtgcaccgggaagacgacacccagggcgacccggccgcgaccctcgccggattcggcgcc
gccgtcgaccgcaccctgccgatgcccggcgccgcaaccgtgctcggcctcagccggcag
atgagcgtcacggacgccagcggcgtgcccaccccgatcaacgtcgactaccgcgccggc
ttctgccggcgggtccggctcaccgccggcacctgcccggccgcggccggcgacgccgcc
ctcaccaccgcggtcgccacccgcctcggcgtgcggcccggcgacttggtccggatccag
tcgaccagcgccgccccgttccttcccctccgggtcaccggcatctacgagatcatcgcc
ccggaaaccggatactgggccgacgagttgtaccggaccggcagcggcaccgacccgatc
tacaccgccgccgccaccttcaccggcgaccagctcggccgggccgtcctcacctggtcg
gccgaggcgccgccggccctgctgcgcggcgccggcggctacgacctcggcgccctcgtc
gcccgggccggcgaactcggcgacgtcgaagacccgaccggaccgctgcgggccgacctg
gccgacgccggcgcccggctgctgcgcgcggtgctgctcgccgccgtcccggtgctgctg
ctcgggtggtacgcgatcgccctggccggccgctacaccgcccgcgaccggcgccgcgac
gctgcctgggcgaaactccgcggcggccgccggcggcgcgtgctgctcctgctttccggg
cagcacctgccgccggtgctggccggcgggctgctcggggcgacggtcggcatcggcgtc
gcccggctcctcgacggggccgcgccgccggtcacggcggccgggtcgccgggtgcgtcc
ggcgtcgacgccgggtcgtggggctcgccggacgtcgtcgccgggtcatcgggatcgccc
ggcgtcgtcgcctggtcgttgggggcggccgggctggtcgtcgggggagcactggccacc
ctggtcatcgccgacctgctgctgctgcgcaccccggtcggcaccctgcagcgcgacatc
cccgccgcgcgcggcgggcgggccgccctgctcgccgacgcgctgctcgtcgcggtcgcg
gtcgccgccgcctaccaggcgcgatccggcagcccggacgccggcgtcggtgcggtcgcg
cccctcgccgtcgccgcggcggtcgcggtgctgctggcccggttgctcatccgggcagcc
gatgcgggcggggcggcggccctgcgggccgggcggctgcgggccgggctggccgccgtc
cggatgtcccggctcgccggactcgaccgggtgttcgccatcctggccgtcgcggtggcg
atcctggtcaccgcggccggagcggccggcgccgaccggcgggcccaccgggaacgcgcc
gaagccgaactcggtgcggcgcgggtgctgaccgtgcgggtgccgaactggacggtgctg
tggcatgcggtgcgggcggcggacccggccgggcggtacgcgatggcggccgcggttgac
cggacggggagcccgccgaccgttgcggtggatttcgggcggctgggggtggtgggggca
tggcggcccgagtacgggccgcgcccagcaccaccggaatcaccggtcccttcggtcctg
ccgaactcgccggacacgccagcctcaccaggaccggccacctcgaccggcacttcgaca
tcaccaggcgccgcaacctcgtccggcacttcgacatcaccaggcgccgcagcctcacga
ggcacatcgaccccgccgggcaccctaggctcgaaaggcacatctgtcgctccggtttcc
ccgacctcggcaggcacggcagcccctcgcggcacccacgcctcggcaggcgcaaaggcc
tctgctgacacgccggcctcaacggcaacgggggccccggcgggaagtgtctcctctctg
ggcacaaaagcccctctgaacacggatgcctcgccaggcacgccggccgcctctgccgcg
ttcgtccctactgggggctcggcccctcaaggaccacaggtatcttcggccccatcgcgg
tcgggtgtcccggtggtctcggtgggcgctgggcccggggtgaccgatggggcaccgggg
accgccgtgatcagtgggcggtcgctcgtgctgaaggtgcgaaatgggcgtacggcggcg
gccaccgtcgatgcggtgctgctcaacgagaccagcggggcgcgggtggtggtgtcgttc
gggccggtgccgcccggtgagcacgccgtgacccggccgctcgacggctgcgacggcggc
tgccggttgctgcgctgggagattcccagcctgcccggcgcggacgggaaacccacgccc
gacccggtggtcctgcactcgctggcccggctcggcccggacgccgagctgatcggcccg
gcccggatggccgacgcgacccgctggcgtaccgtcgcggccggcgtcggcctgcaactc
agcggcggtccggacggtctgaccgtcaccgccgcgccgaacggcggcacagccgacagc
gaccgggtgttcgccgtggacagtctgctgccgctgcccgtgctgctggccggcccgacg
ccggtgccgtggcggttcgccgagccggagatcaccgtgctgggcgccgggccggtgccg
gcccgggtgaccgggacggccgccgcgctgccggtgaccggcgccgccgggatcctcctc
gacttcgacacggtgcgccggacggccggggagttctcgccggccggcgaaacccaggtg
tggctgaccgcgaacgccccgcccgacgtcgtcgaccggctcagggccgccggggtcacc
gtgctcggcgacgagagcatcgccggccgggcggctcgccggcccggccggggcaccgcc
ccggccggaccgttcgcgctgctctgcgcggtgtccgcggtgttcaccgcggccggcgcc
accgcggtcgcggcggcggtcgaccgggtaccgcagcgggccgccaccgccgcgctgcgg
gtgcaggggctgcccgcccgggcggctgccgcgacccgctatctggggccgtcagccctg
gtcgcggccggcaccctgggcggggtggcggcggccctggtggcgcggtggatcaccggg
gagccggaatccttcttcgccgacgggtggcgcctcctgccgccacccgaggtgctcggc
ggggcgccgctgctcctcgccgccttcgccgcgtggctgttcctcaccctcctggccgcg
ctggccgcccgcaccgaaggcgaccaccgatga
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