Actinoplanes sp. SE50/110: ACPL_2658
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Entry
ACPL_2658 CDS
T02044
Symbol
sigH
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03090
RNA polymerase sigma-B factor
Organism
ase
Actinoplanes sp. SE50/110
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ase03021
]
ACPL_2658 (sigH)
Transcription machinery [BR:
ase03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPL_2658 (sigH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
STAS
STAS_2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
HTH_3
HTH_Crp_2
Sigma70_ECF
MarR
MarR_2
DUF7343
TCAD7
HTH_AraC
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
AEV83553
UniProt:
G8S3I7
LinkDB
All DBs
Position
2877461..2878570
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AA seq
369 aa
AA seq
DB search
MRDLDRLEPLEDLDLMADRYAHACERADCREQRRLRERFVREALPFAGRLARRYRGRGEP
TDDLVQVARLGLIKTVDRFDPQRGSFTAYAILTITGEIKRHFRDHTWGVHVPRGQQDRVL
EFVHARAELTSELARTPTLAELAERLGLDETQVRGAQTSAAAHNTESLNVPLGDTGSEAG
DLIGDVDGDLSLVDDRTTVESLLCELPARERRLLALRFWGNLSQVEIADELGISQMHVSR
LLSRTLSWLREAMLTDVTPPWAGAGAPEHLVLATAVPDGVRADVRGEIDRDNANQVRRDL
MTAAGTCGRGRRLTVDLSGVPLLSAAGIGMLTAVYEVARQREVRMLITGVQPYVARVLAI
SGLGELLVP
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacctggaccggctggaaccacttgaagacctggacctgatggccgacaggtac
gcccacgcatgcgaacgcgccgactgccgggaacagcggcgactgagagaacgcttcgtc
cgggaggcgctgccgttcgccggacggctggcccgccgctaccgcggacgcggcgagccc
accgacgacctggtgcaggtggcgcggctggggctgatcaagacggtggaccggttcgac
ccacagcggggatcgttcaccgcgtacgcgatcctgaccatcaccggggagatcaaacgg
cacttccgggaccacacctggggggtgcacgtgccgcgcggacagcaggaccgggtgctc
gaattcgtgcacgcccgcgccgagctgaccagcgaactggcccgcacaccgacgttggcc
gagttggccgaacgcctcggcctggacgagacgcaggtgcgcggcgcgcagacgtccgcg
gccgcgcacaacaccgaatcgctgaacgtgccgctcggcgacaccggctccgaggccggc
gacctgatcggcgacgtggacggcgacctgtccctggtcgacgaccggaccaccgtcgaa
agcctgctctgcgagctgccggcccgcgagcggcggctactggcgctgcggttctggggc
aacctgagccaggtcgagatcgccgacgaactgggcatctcgcagatgcacgtgtcccgg
ctgctcagccgcaccctgtcctggctgcgcgaggcgatgctgaccgacgtgacgccgccc
tgggccggcgccggcgccccggaacacctggtgctggccaccgccgtgccggacggggtg
cgggccgacgtgcgcggcgagatcgaccgggacaacgccaaccaggtgcgccgcgatctg
atgaccgcggccggcacctgcgggcggggccgccggctgaccgtcgacctgtccggggtc
ccgctgctgagcgcggccgggatcgggatgctgaccgcggtgtacgaggtggcccggcag
cgcgaggtgcggatgctgatcaccggggtgcagccgtacgtggcccgggtgctggccatc
tccggcctgggcgagctgctggtcccctga
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