Actinoplanes sp. SE50/110: ACPL_4300
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Entry
ACPL_4300 CDS
T02044
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K02405
RNA polymerase sigma factor FliA
Organism
ase
Actinoplanes sp. SE50/110
Pathway
ase02020
Two-component system
ase02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACPL_4300
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACPL_4300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ase03021
]
ACPL_4300
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ase02035
]
ACPL_4300
Transcription machinery [BR:
ase03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPL_4300
Bacterial motility proteins [BR:
ase02035
]
Flagellar system
Flagellar assembly proteins
Stator
ACPL_4300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
Rv2175c_wHTH
HTH_23
KORA
Motif
Other DBs
NCBI-ProteinID:
AEV85191
LinkDB
All DBs
Position
4723040..4723909
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AA seq
289 aa
AA seq
DB search
MTATAQHTGNTRSVSREQEQMIRDNMALVGHMVREMLFKVPPHVHRDDLASAGYAALVTA
AQAYDPARGIPFGRFAAVRVRGALLDELRSMDWASRSVRARARRADVAREELTRQLGRTP
TAEELAELLGVAVGELSSVDDDVQRAAVLSLQGFTSGTAEDMVTESAMNPEEMLLHRERL
GYLHDAVTVLPERLRFVVEASFLQERPLSEVAAELGVTESRVSQLRTEALALLRDGLTTH
MEQVSGPVAKDGCVARRRAAYAAQIAARSTMATRLSATDAQGMRLAVAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaccgcgcagcacaccggcaacacccgctccgtcagccgggagcaggagcag
atgatccgcgacaacatggcgcttgtcggtcacatggtccgcgagatgctgttcaaggtt
ccgccgcacgtgcaccgcgacgacctggcctcggccggctacgccgcgctggtcaccgcc
gcgcaggcctacgacccggcacgcggcatcccgttcggccgtttcgccgccgtccgggtc
cgcggcgcactgctcgacgagctgcgcagcatggactgggcgagccggtcggtgcgcgcc
cgggcccgccgcgccgatgtggcccgcgaggagctgacccgccagctgggccgcaccccg
accgccgaggaactggccgaactgctcggtgtcgcggtcggcgagctcagcagcgtcgac
gacgacgtgcagcgtgccgcggtgctgtcgttgcaggggttcacctcgggcaccgccgag
gacatggtgaccgagtcggcgatgaacccggaggagatgctgctgcaccgggagcgcctg
ggctacctgcacgacgcggtgacggtgctcccggagcggctgcggttcgtggtcgaggcc
tcgttcctgcaggagcgtccgctgtccgaggtcgccgccgagctcggggtgaccgagtcg
cgggtgtcgcagctgcgcaccgaggctctcgccctgctgcgcgacggtctgaccacgcac
atggagcaggtgtccggcccggtcgccaaggacgggtgtgtcgcccggcgccgcgccgcg
tacgccgcgcagatcgccgcccgctcgaccatggcgacgcggctgagtgccaccgacgcg
cagggcatgcgcctggccgtggcggcatga
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