Actinoplanes sp. SE50/110: ACPL_5020
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Entry
ACPL_5020 CDS
T02044
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ase
Actinoplanes sp. SE50/110
Pathway
ase00040
Pentose and glucuronate interconversions
ase01100
Metabolic pathways
ase02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ACPL_5020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACPL_5020
Enzymes [BR:
ase01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ACPL_5020
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
AEV85909
UniProt:
G8RZT8
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Position
complement(5458122..5459081)
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AA seq
319 aa
AA seq
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MSPSRRTFLAATTAGVLTAGGALGVSPLSAAAAESSPVGFASLNGGTAGGSSSTVVTVTS
ASALKSALSSGTSQTVRISGLITISGMYRVASHKTIIGVGASSGVTGGGFTLNGVKNVII
RNLVFKNAGDDSINLQDGTTNVWIDHNDLSNGYDGLIDIKRGSDFVTVSWNHLHHHDKSM
LLGHSDDNGAQDTGHLRVTYVHNWFDGTNQRHPRVRFANPVHVLNNYYSNIGAYGVASTE
NAGVFVERNYFENVDHPTVTQTGDSDPGNLKVLNNYRVNSGTEEVRNGGSVAAIPYPYTP
EANSSVKATVVAGAGTGKI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtccccatcacgtcgtaccttcctggccgccaccacggccggcgtcctcaccgccggc
ggcgcactcggcgtcagcccgctcagcgcggccgccgccgagtccagcccggtcgggttc
gccagcctcaacggcggcaccgcgggcggctcgtcgagcaccgtcgtcacggtgaccagc
gcctcggcgctcaagtcggcgctgagctcgggcacctcgcagaccgtccggatctccggg
ctgatcacgatctccggcatgtaccgcgtcgcctcgcacaagacgatcatcggcgtcggc
gcgagcagcggcgtcaccggcggcggcttcaccctcaacggcgtcaagaacgtgatcatc
cgcaacctggtgttcaagaacgccggcgacgactcgatcaacctgcaggacggcaccacc
aacgtgtggatcgaccacaacgacctgtccaacggttacgacggcctgatcgacatcaaa
cgcggctcggacttcgtcaccgtctcctggaaccacctgcaccaccacgacaagtcgatg
ctgctcggacacagcgacgacaacggcgcccaggacaccgggcacctgcgcgtcacctac
gtccacaactggttcgacggaaccaaccagcggcacccgcgggtccggttcgccaacccg
gtgcacgtgctgaacaactactacagcaacatcggcgcgtacggggtggcctccaccgag
aacgccggagtcttcgtcgaacgcaactatttcgagaacgtcgaccatcccacggtcacc
cagaccggcgactcggatcccggcaacctcaaggtgctgaacaactaccgggtcaactcg
gggaccgaggaggtccgcaacggcggcagtgtcgcggccatcccgtacccctacacgccc
gaggccaacagctcggtcaaagccaccgtggtggccggggcgggcaccggcaagatctga
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