Actinoplanes sp. SE50/110: ACPL_5312
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Entry
ACPL_5312 CDS
T02044
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ase
Actinoplanes sp. SE50/110
Pathway
ase03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACPL_5312 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ase03400
]
ACPL_5312 (xthA)
Enzymes [BR:
ase01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACPL_5312 (xthA)
DNA repair and recombination proteins [BR:
ase03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACPL_5312 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Nas2_N
Motif
Other DBs
NCBI-ProteinID:
AEV86199
UniProt:
G8S5J7
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All DBs
Position
5794424..5795197
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AA seq
257 aa
AA seq
DB search
MRFATWNVNSVKARLPRLLEWLETAAPDVVGLQETKVAEDGFPAAEVRELGYRTAAYGQG
RWNGVALLSRIGLDEVRRGFPGEPGYPGPEARAISAVCDGIRFMSVYVPNGRTPDDPHYT
YKLQWLRALRLALADDLAAGPLIVAGDFNVAPTDDDVWDPSVFAGSTHVTEPERAAIAAL
RDLGLTDVPARAMKGDHPFTYWDYRAGMFHQNKGMRIDHVYASAELAAAVTDAVVDREAR
KGKGPSDHAPVIVDVKR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcgcgacctggaacgtcaactcggtgaaagcccgcctcccccgcctgctggag
tggctggagaccgccgcccccgacgtggtcggcctgcaggagaccaaggtcgccgaggac
ggcttcccggccgccgaggtccgcgagctgggataccggacggcggcgtacggtcagggc
cgctggaacggcgtcgccctgctctcccggatcggcctggacgaggtccgccgcggcttc
cccggcgagcccggctatcccggcccggaggcccgcgcgatcagcgcggtctgcgacggc
atccggttcatgtcggtgtacgtgccgaacggccgcaccccggacgacccgcactacacc
tacaaactccagtggctgcgggcgctgcggctcgccctcgccgacgacctggcggccggc
ccgctgatcgtggccggcgacttcaacgtggcgcccaccgacgacgacgtgtgggatccg
tcggtgttcgccggctccacccacgtgaccgagccggagcgggccgccatcgccgcgctg
cgcgacctcgggctcaccgacgtgccggcccgcgccatgaagggtgaccacccgttcacc
tattgggattaccgcgccgggatgttccatcagaacaagggcatgcgcatcgaccacgtg
tacgcgagcgccgaactggccgccgcggtcacggatgccgtggtggaccgcgaggcacgc
aagggcaagggcccgtccgaccacgccccggtgatcgtcgatgtgaaacgctga
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