Actinoplanes sp. SE50/110: ACPL_607
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Entry
ACPL_607 CDS
T02044
Symbol
sigH
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03090
RNA polymerase sigma-B factor
Organism
ase
Actinoplanes sp. SE50/110
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ase03021
]
ACPL_607 (sigH)
Transcription machinery [BR:
ase03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPL_607 (sigH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_10
MarR
DUF7343
DUF134
GerE
HTH_3
HTH_24
NirdL-like_HTH
MarR_2
HTH_31
HTH_Tnp_4
Sigma70_ECF
HTH_AraC
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
AEV81504
UniProt:
G8SCP4
LinkDB
All DBs
Position
complement(567557..568369)
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AA seq
270 aa
AA seq
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MTVTQTSTTVDRSTVTSAESPVDSAAELLNAMAAMPAGHPSRAALRDRAIEAWLPLARHL
ANRYAGRGEPTDDLIQTATVGLIKAVDKFDPERGVDFAGYAIPTIIGEIKRHFRDRTWSV
RVPRRLQELRLAITEANATLTHSLGRSPTVPDIATHLGISEEEVLEGLEGARAYNATSLS
TPISADGTTELGETLGGEDHEFELAETRVALAPALAMLDEREQRILTLRFYGNLTQSQIA
DQIGISQMHVSRLLTKALVKLRGQLAAETL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcacacagacttcgacgaccgtcgaccggtcgacggtgaccagcgccgaaagc
cccgtggacagtgccgcggaactgctcaacgcgatggccgcgatgcccgccgggcacccg
tcccgggccgcgctgcgcgaccgggcgatcgaggcctggctgccgctggcccgccacctc
gccaaccgctacgccggccgcggcgaaccgaccgacgacctgatccagaccgccaccgtc
ggcctgatcaaggccgtcgacaagttcgacccggagcgcggcgtcgacttcgccggctac
gccatccccaccatcatcggcgagatcaagcgccacttccgcgaccgcacctggtcggtc
cgcgttccgcgccggctgcaggagctccgcctcgccatcaccgaggccaacgcgaccctg
acccactccctcggccgttcgccgacggtgccggacatcgccacccacctcggcatcagc
gaggaggaggtgctggagggcctggagggcgcccgcgcctacaacgcgacgtcgctgtcc
accccgatcagcgcggacggcaccaccgagctgggcgagacgctgggcggcgaggaccac
gagttcgagctggccgagacccgggtggcgctggctccggcgctggccatgctggacgag
cgcgagcagcggatcctgacgctgcgcttctacggcaacctgacccagtcgcagatcgcc
gaccagatcggcatctcccagatgcacgtctcccgcctgctgaccaaggcgctggtgaag
ctgcgcggccagctggccgccgagacgctctga
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