Actinoplanes sp. SE50/110: ACPL_6173
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Entry
ACPL_6173 CDS
T02044
Symbol
sigH
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03090
RNA polymerase sigma-B factor
Organism
ase
Actinoplanes sp. SE50/110
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ase03021
]
ACPL_6173 (sigH)
Transcription machinery [BR:
ase03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPL_6173 (sigH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
HTH_10
MarR
DUF134
HTH_23
Sigma70_ECF
DUF7343
HTH_24
HTH_31
GerE
HTH_Tnp_4
MarR_2
HTH_37
Motif
Other DBs
NCBI-ProteinID:
AEV87058
UniProt:
G8SM79
LinkDB
All DBs
Position
complement(6794797..6795591)
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AA seq
264 aa
AA seq
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MTVIVDTAARADASASTDRASELINAMAVLPAGHPSRPGLRERAIEAWLPLARHLSQRYA
NRGEPRDDLYQVAVMGLIKAVDRFETDRGVDFAGFAIPTIVGELKRYFRDKTWSVRVPRR
LQELRLAITAANNTLSHTLGRAPTVTDIAGYLDVSEDEVIEGLEGARAYNSTSLSTPMSE
SGTELGDTLGGPDTGYEEVERRVMLGPAMAHLDEREQKIVTLRFYGNLTQQQIAEQIGIS
QMHVSRLLTKALAKLRRNLDGATR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatcgttgacaccgctgcccgcgccgacgcgtcggcgagcaccgaccgggcc
agcgagttgatcaacgccatggcggtcctgccggccggtcacccgtcccggcccggtctg
cgggagcgcgccatcgaggcatggctgcccctggcccggcacctgtcgcagcggtacgcc
aaccggggcgagccgcgcgacgatctgtaccaggtcgccgtcatgggactgatcaaggcg
gtcgaccggttcgagaccgatcgtggcgtcgacttcgccggtttcgcgatcccgaccatc
gtcggtgaactcaagcggtacttccgggacaagacctggtccgtccgggttccgcggcgt
ctgcaggaactcaggctggccatcaccgcggccaacaacaccctgtcgcacaccctgggg
cgcgccccgacggtcaccgacatcgccggctacctcgacgtcagcgaggacgaggtcatc
gagggcctcgaaggggcccgtgcctacaactcgacgagcctgtcgacaccgatgagcgag
agcggcaccgagctcggcgacaccctcggcggccccgacaccgggtacgaggaagtcgag
cgacgcgtcatgctcggcccggccatggcccatctcgacgagcgcgagcagaagatcgtc
accctgcgcttctacggcaacctgacgcagcagcagatcgccgagcagatcggtatctcc
cagatgcacgtctcccggctgctgaccaaggccctggccaaactgcgccgcaacctcgac
ggcgccacgcgctga
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