Actinoplanes sp. SE50/110: ACPL_708
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Entry
ACPL_708 CDS
T02044
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ase
Actinoplanes sp. SE50/110
Pathway
ase03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACPL_708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ase03019
]
ACPL_708
03400 DNA repair and recombination proteins [BR:
ase03400
]
ACPL_708
Enzymes [BR:
ase01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACPL_708
Messenger RNA biogenesis [BR:
ase03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACPL_708
DNA repair and recombination proteins [BR:
ase03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACPL_708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
AEV81605
UniProt:
G8SEB4
LinkDB
All DBs
Position
697998..700124
Genome browser
AA seq
708 aa
AA seq
DB search
MTADAAERASVRERAEQVLRRLAGEHARLREDQWRAIEALTVDRRRVLCVQRTGWGKSAV
YFVATALLRAGGSAGPTVIVSPLLALMRNQVDAAARAGIRARTINSANLDEWSEIEQEIR
AGTVDVLLISPERLNNPDFRDNVLPGLAHSTGLLVVDEAHCVSDWGHDFRPDYRRLRTFL
AGLPGRTPVLATTATANARVTADVADQLGDALVLRGPLDRDSLRLAVLRLPEPAHRLAWL
ADHLERLPGSGIVYTLTVAAATETADFLRSRNFPVASYTGQVDDAERRAAEQDLLDNKIK
ALVATSALGMGFDKPDLGFVVHLGAPNSPIAYYQQVGRAGRAVEHAEVVLLPGPEDAAIW
RYFASLAFPPEDQVRSVLAQLSADRPMSTQALEPLVDLRRNRLELMLKVLDVDGAVRRTR
GGWLATGEPWTYDTARLRRVAEARSAEQQTMLEYAVTPTCRMEFLRRCLDDPEATPCGRC
DNCAEPLFGPDVSAGSLAAAEAFLGRPGVEVAPKKMWPTGMTAVGISLKGKIGPAEQVEP
GRAVGRLSDLGWGARLRGVVGPESPDAPIPAELAAAVVEVLKAWARGDDAWAQRPVGVVA
VGSRRHPQLVHSLAEHIATVGRLPLLGVLTSAGSGEETFRGNSAQRVRALHNAFTVPPEV
AAGLTVHQGPLLLVDDLVDSGWTMALAGRTLRQSGAHSVLPLALAVAS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgatgcggccgagcgggcgagtgtgcgggagcgcgccgagcaggtgctgcgc
cggctcgccggagagcacgcgagactgcgagaggatcagtggcgtgccatcgaggcgctc
accgtcgaccggcgccgggtgctgtgcgtgcagcgcaccgggtggggcaagtcggcggtc
tatttcgtggccaccgccctgctgcgggccggcggttcggccggccccacggtgatcgtg
tccccgctgctcgcgctcatgcgcaaccaggtcgacgcggctgcccgggccggcatccgg
gctcgcaccatcaactcggccaacctcgacgagtggtccgagatcgagcaggagatccgg
gccggcacggtcgacgtgctgctgatcagccccgagcggctgaacaatcccgacttccgc
gacaacgtgctgcccggcctcgcccacagcaccgggctgctcgtggtcgacgaggcgcac
tgcgtctccgactggggtcacgacttccggcccgactatcgccgtctgcgcaccttcctg
gccggcctgcccggccgcaccccggtgctggccaccacggccaccgcgaatgcccgggtc
accgccgacgtcgccgaccagctcggcgacgcgctggtgctccgcgggccgctcgaccgg
gattcgctgcgcctcgcggtgctgcggctgcccgagccggcacaccggttggcctggctc
gccgaccatttggagcgcctgcccggctccggcatcgtctacacgctcaccgtcgcggcc
gccaccgagaccgccgacttcctgcggtcccgaaattttccggtcgcttcgtacacgggc
caggtcgacgacgccgagcgccgcgccgccgagcaggacctgctggacaacaagatcaag
gcgttggtggcgacgtccgcgctcggcatgggtttcgacaagcccgacctcggcttcgtc
gttcacctcggcgcgccgaattccccgatcgcgtattaccagcaggtcggtcgcgccggc
cgggccgtcgagcacgccgaggtggtgctgctgcccggcccggaggatgcggcgatctgg
cgatatttcgcctcgctggccttcccgccggaggatcaggtgcgttcggtgctggcccag
ctctccgccgaccggccgatgtccacgcaggccctggagcccctggtcgatctgcggcgc
aaccgcctggagctgatgctcaaggtgctggacgtcgacggggcggtccgccgcacacgt
ggcggctggctcgccaccggcgagccgtggacctacgacaccgcccggttgcggcgcgtc
gccgaggcgcgctccgccgagcaacaaaccatgctcgagtacgccgtgacccccacctgc
cggatggaattcctccgcagatgcctcgacgacccggaggccacaccgtgcggccggtgt
gacaactgtgccgagccgctcttcggcccggacgtgtcggccggctcgctggccgccgcc
gaggcgttcctcggccgtcccggggtggaggtcgcgccgaagaagatgtggcccaccggc
atgaccgcggtcggcatctcgctgaagggcaagatcgggccggccgagcaggtcgagccg
ggccgggccgtcggccgcctctccgatctcggctggggcgcccgcctacgcggcgtggtc
ggccccgagtccccggacgcaccgatcccggccgagctcgccgccgcggtcgtcgaggtc
ctcaaagcgtgggcgcgcggcgatgacgcctgggcccagcgcccggtcggcgtcgtggcg
gtcggctcacgacgtcatccacaacttgtccacagcctcgccgagcacatcgcaacggtc
ggccgcctaccgttgctcggcgtcctcacctcagccggttccggagaggagacgttccgc
ggcaacagcgcccagcgcgtccgcgccctgcacaacgccttcaccgttccacccgaggtc
gccgccggcctcaccgttcaccagggcccgctgctgctggtcgacgacctggtcgactcg
ggctggacgatggccctggccggccgcaccctacgccagtccggcgcccactccgtcctt
ccgctggccctggccgtcgccagctga
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