| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
ase Actinoplanes sp. SE50/110
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ase00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACPL_774 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ase03021]
ACPL_774 (rpoC)
03400 DNA repair and recombination proteins [BR:ase03400]
ACPL_774 (rpoC)
Enzymes [BR:ase01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACPL_774 (rpoC)
Transcription machinery [BR:ase03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACPL_774 (rpoC)
DNA repair and recombination proteins [BR:ase03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACPL_774 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
765417..769307
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| AA seq |
1296 aa
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAASVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDAEARHRDMSTIENEIFAEKRQSENSRDSEIEKRAAKLEQD
LAELEAEGAKADVRRKVKEAGEREMRQIRDKAQREIDRLDEVLDTFRKLDSKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALLQNMDLDAEADNLREIIRSGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPRLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHLTAGAKGEGR
VFSSDAEARMAFDNGELHLQAPVKIRLRDVIGVDNGAKQAAWEAPEEWVEGEPLLVETTL
GRVIFNETLPPGYRFVNYEIRKGQLSAIVNDLAERFPKVALAATLDALKEAGFHWATWSG
VTIGMGDVIGPPRKPEILARYQVEADRIDKQYQRGLMTAEERRGELIEIWTKATNEISKE
METALPQENPLWVMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPITSSYREGLTVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMAVGEREPDG
TLVVHTHAETGVHARTIADDISDPNGNLVVARGTDLNSIIVDQLVAAGVENVRVRSVLTC
ESKLGVCAACYGRSLPTGKSVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQG
LPRVQEIFEARVPKGKAPIADTPGRIRIEDGERSRKIIVIPDDGSEEIVYDKISKRVKLR
AHDGDHVQVGEKLTEGTIDPHELLRIMGPRAVQVHLTSEVQEVYRSQGVLIHDKHIEIII
RQMLKRVTVIDSGATEFLPGVLVDRALFESENRRLVGEGGEPAAGRPVLMGITKASLATD
SWLSAASFQETTRVLTDAAINSRSDSLVGLKENVIIGKLIPAGTGISKYRNIRVEPTEEA
KAKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR |
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| NT seq |
3891 nt +upstreamnt +downstreamnt
gtgctcgacgtcaacttcttcgacgagttgcgcatcggcctggcgactgctgacgacatc
cggcagtggtcgcacggcgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
ccggagaaggacggactcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggtaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgttccaaggtccggcgtgagcgcatgggccacatcgagctggccgcgtcc
gtcacccacatctggtacttcaagggtgttccgagccgcttgggctatctgctcgacctg
gctcccaaggacctcgagaagatcatctacttcgcctcgtacgtggtcaccagcgtggac
gccgaggcgcgtcaccgcgacatgtcgaccatcgagaacgagatcttcgcggagaagcgg
cagtccgagaacagccgcgactcggagatcgagaagcgggccgccaagctcgagcaggac
ctcgccgagctggaggccgagggcgccaaggcggacgtgcgccgcaaggtcaaggaagcc
ggcgagcgcgagatgcgccagatccgggacaaggcccagcgcgagatcgaccgcctcgac
gaggtgctcgacacgttccgcaagctcgactccaagcagctggtcaccgacgaactgctc
taccgcgagctgcgcgaccgcttcggtgagtacttcaccggtggcatgggcgccgaggcg
atcaaggccctgctgcagaacatggacctggacgccgaggcggacaacctccgggagatc
atccggtccggcaagggccagcggaagatccgggcgctcaagcggctcaaggtcgtcgcg
gcgttcctgaacacccgcaactcgccgctcggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgccacgtccgacctg
aacgacctgtaccgccgggtgatcaaccggaacaaccgcctcaagcggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccggccggtcaccggcccgggcaaccgcccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcggctcaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgtcagcgt
ccggtcgtgtgggacgtgctggaggaggtcatcagcgagcacccggtgctgctgaaccgt
gctccgaccctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gcgatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggcggtgcacgtgccgctgtcggccgaggcgcaggccgaggcccggatcctgatgctc
tcgtcgaacaacatcctcaagccggccgacggcaagccggtcaccatgccgacccaggac
atggtcatcggcctgtaccacctgacgcacctcaccgcgggtgccaagggtgagggccgg
gtgttcagctcggacgccgaggcgcggatggcgttcgacaacggcgagctgcacctgcag
gccccggtgaagatccggctgcgggacgtcatcggtgtcgacaacggggccaagcaggcc
gcgtgggaggcgccggaggagtgggtcgagggcgagccgctgctcgtcgagaccacgctc
ggccgggtcatcttcaacgagacgctgcccccgggctaccgcttcgtgaactacgagatc
cgcaagggtcagctgtcggcgatcgtcaacgacctcgccgagcgcttccccaaggtcgcc
ctggccgcgaccctggacgcgctcaaggaggccggcttccactgggccacctggtccggt
gtgacgatcggcatgggcgacgtcatcggtcccccgcgcaagccggagatcctggcccgc
taccaggtcgaggcagaccggatcgacaagcagtaccagcgtggtctgatgaccgccgag
gagcgtcgcggcgagctcatcgagatctggaccaaggcgaccaacgagatctccaaggag
atggagaccgcgctgccgcaggagaacccgctctgggtgatgatcaactccggcgcccgc
ggtaacctgctccagctccggcagatcgccgcgatccgtggtctggtggccaaccccaag
ggtgagatcatcccgcggccgatcacctcgtcgtaccgcgagggtctgaccgtgctggag
tacttcatctccacccacggtgcccgtaagggtctggccgacaccgcgctgcggaccgcc
gactcgggttacctgacccggcgtctggtggacgtctcgcaggacgtcatcatccgcgag
gaggactgcggcaccgaccgcgccatcccgatggcggtcggcgagcgcgagccggacggc
accctggtcgtgcacacccacgccgagaccggcgtgcacgcccggaccatcgccgacgac
atcagcgacccgaacggcaacctggtcgtcgcccgcggtacggacctgaactcgatcatc
gtcgaccagctggtcgccgccggtgtcgagaacgtccgggtgcgcagcgtgctgacctgt
gagtcgaagctgggcgtctgcgcggcctgctacggccgttcgttgccgaccggcaagtcg
gtcgacatcggcgaggcggtcggcatcatcgcggcccagtccatcggtgagccgggtacc
cagctgacgatgcgtaccttccacaccggtggtgtcgcgggtgaggacatcacccagggt
ctgccgcgtgtccaggagatcttcgaggcccgggtgccgaagggcaaggcgccgatcgcc
gacacccccggacgcatccggatcgaggacggcgagcggtcgcggaagatcatcgtgatc
ccggacgacggcagcgaggagatcgtctacgacaagatctccaagcgcgtcaagctgcgg
gcgcacgatggcgaccacgtgcaggtcggcgagaagctcaccgagggcaccatcgacccg
cacgagctgctgcgcatcatgggcccgcgcgcggtccaggtccacctgaccagtgaggtc
caggaggtctaccgctcgcagggtgtgctcatccacgacaagcacatcgagatcatcatc
cgccagatgctcaagcgggtgacggtcatcgactccggcgcgaccgagttcctcccgggc
gtgctggtcgaccgggcgctcttcgagtcggagaaccgccgactcgtgggcgagggtggc
gagcccgccgccggtcgtccggtgctgatgggtatcaccaaggcctcgctggccaccgac
tcctggctctcggcggcctccttccaggagaccacccgggtgctgaccgacgcggcgatc
aactcgcgcagcgactcgctggtcggcctcaaggagaacgtcatcatcggcaagctcatc
ccggccggtaccggtatctccaagtaccgcaacatccgggtcgagcccaccgaggaggcc
aaggccaaggtgtactcgatgaccgggtacccggagaccgactacggcttcgggccggcc
agcgggcaggctgtgccgctggacgacttcgacttcgggtcgtaccgctaa |
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